RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 RHNO1Q9BSD3 238 aa15.5■□□□□ 0.07
CLDND1-220ENST00000508902 RAB1BQ9H0U4 201 aa15.5■□□□□ 0.07
CLDND1-220ENST00000508902 SLC25A19Q9HC21 320 aa15.5■□□□□ 0.07
CLDND1-220ENST00000508902 HINT3Q9NQE9 182 aaKnown RBP15.5■□□□□ 0.07
CLDND1-220ENST00000508902 TBCCD1Q9NVR7 557 aa15.5■□□□□ 0.07
CLDND1-220ENST00000508902 ATPIF1Q9UII2 106 aa15.5■□□□□ 0.07
CLDND1-220ENST00000508902 TMEFF2Q9UIK5 374 aaPredicted RBP15.5■□□□□ 0.07
CLDND1-220ENST00000508902 CUBNO60494 3623 aa15.49■□□□□ 0.07
CLDND1-220ENST00000508902 C17orf100A8MU93 164 aa15.49■□□□□ 0.07
CLDND1-220ENST00000508902 M0R129 80 aa15.49■□□□□ 0.07
CLDND1-220ENST00000508902 DAOP14920 347 aa15.49■□□□□ 0.07
CLDND1-220ENST00000508902 COL8A2P25067 703 aa15.49■□□□□ 0.07
CLDND1-220ENST00000508902 PDLIM4P50479 330 aa15.49■□□□□ 0.07
CLDND1-220ENST00000508902 PSG7Q13046 419 aa15.49■□□□□ 0.07
CLDND1-220ENST00000508902 SLC27A4Q6P1M0 643 aa15.49■□□□□ 0.07
CLDND1-220ENST00000508902 TMEM154Q6P9G4 183 aa15.49■□□□□ 0.07
CLDND1-220ENST00000508902 Q6ZR03 302 aa15.49■□□□□ 0.07
CLDND1-220ENST00000508902 COLCA1Q6ZS62 124 aa15.49■□□□□ 0.07
CLDND1-220ENST00000508902 ATG16L2Q8NAA4 619 aa15.49■□□□□ 0.07
CLDND1-220ENST00000508902 GJC3Q8NFK1 279 aa15.49■□□□□ 0.07
CLDND1-220ENST00000508902 NEU4Q8WWR8 484 aaPredicted RBP15.49■□□□□ 0.07
CLDND1-220ENST00000508902 BPESC1Q9GZL8 116 aa15.49■□□□□ 0.07
CLDND1-220ENST00000508902 HDHD2Q9H0R4 259 aa15.49■□□□□ 0.07
CLDND1-220ENST00000508902 GABARAPL1Q9H0R8 117 aa15.49■□□□□ 0.07
CLDND1-220ENST00000508902 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.49■□□□□ 0.07
CLDND1-220ENST00000508902 GRIP1Q9Y3R0 1128 aa15.49■□□□□ 0.07
CLDND1-220ENST00000508902 JMJD1CQ15652 2540 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 VSTM5A8MXK1 200 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 RP2O75695 350 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 HLA-DQA2P01906 255 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 ACSM4P0C7M7 580 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 HOXB4P17483 251 aaPredicted RBP15.48■□□□□ 0.07
CLDND1-220ENST00000508902 NR4A2P43354 598 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 PRSS12P56730 875 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 DSCR9P59020 149 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 ACTR3P61158 418 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 LOXL1Q08397 574 aaPredicted RBP15.48■□□□□ 0.07
CLDND1-220ENST00000508902 RIN1Q13671 783 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 NKPD1Q17RQ9 610 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 KDM4DQ6B0I6 523 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 ZNF786Q8N393 782 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 PARP8Q8N3A8 854 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 ST7LQ8TDW4 575 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 AMELYQ99218 206 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 SOX7Q9BT81 388 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 SEMA6AQ9H2E6 1030 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 MARCH7Q9H992 704 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 EIF3KQ9UBQ5 218 aaKnown RBP15.48■□□□□ 0.07
CLDND1-220ENST00000508902 CACNG2Q9Y698 323 aa15.48■□□□□ 0.07
CLDND1-220ENST00000508902 RIIAD1A6NNX1 92 aa15.47■□□□□ 0.07
CLDND1-220ENST00000508902 LILRA1O75019 489 aa15.47■□□□□ 0.07
CLDND1-220ENST00000508902 IGHV1-46P01743 117 aa15.47■□□□□ 0.07
CLDND1-220ENST00000508902 CSF3P09919 207 aa15.47■□□□□ 0.07
CLDND1-220ENST00000508902 SLC25A16P16260 332 aa15.47■□□□□ 0.07
CLDND1-220ENST00000508902 ZNF3P17036 446 aa15.47■□□□□ 0.07
CLDND1-220ENST00000508902 SLC2A5P22732 501 aa15.47■□□□□ 0.07
CLDND1-220ENST00000508902 FASP25445 335 aa15.47■□□□□ 0.07
CLDND1-220ENST00000508902 GIFP27352 417 aa15.47■□□□□ 0.07
CLDND1-220ENST00000508902 OTX1P32242 354 aaPredicted RBP15.47■□□□□ 0.07
CLDND1-220ENST00000508902 HLXQ14774 488 aaPredicted RBP15.47■□□□□ 0.07
CLDND1-220ENST00000508902 TRIP10Q15642 601 aa15.47■□□□□ 0.07
CLDND1-220ENST00000508902 CARTPTQ16568 116 aa15.47■□□□□ 0.07
CLDND1-220ENST00000508902 ZNF718Q3SXZ3 478 aa15.47■□□□□ 0.07
CLDND1-220ENST00000508902 TIGD4Q8IY51 512 aa15.47■□□□□ 0.07
CLDND1-220ENST00000508902 UBASH3BQ8TF42 649 aa15.47■□□□□ 0.07
CLDND1-220ENST00000508902 PKP2Q99959 881 aa15.47■□□□□ 0.07
CLDND1-220ENST00000508902 ELOVL3Q9HB03 270 aa15.47■□□□□ 0.07
CLDND1-220ENST00000508902 PAPOLBQ9NRJ5 636 aaKnown RBP15.47■□□□□ 0.07
CLDND1-220ENST00000508902 DDX28Q9NUL7 540 aaKnown RBP15.47■□□□□ 0.07
CLDND1-220ENST00000508902 KCNG2Q9UJ96 466 aa15.47■□□□□ 0.07
CLDND1-220ENST00000508902 LOC390937A0A1W2PQ73 354 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 H3BSA7 217 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 WNT9BO14905 357 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 CIB2O75838 187 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 IFNGP01579 166 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 IL2RGP31785 369 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 POLR2IP36954 125 aaKnown RBP15.46■□□□□ 0.07
CLDND1-220ENST00000508902 ENTPD1P49961 510 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 CRISP1P54107 249 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 TMEM249Q2WGJ8 235 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 PLBD1Q6P4A8 553 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 DCXRQ7Z4W1 244 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 OR6K6Q8NGW6 343 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 PITX2Q99697 317 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 ATF6BQ99941 703 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 C1QTNF5Q9BXJ0 243 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 MS4A5Q9H3V2 200 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 ZNF556Q9HAH1 456 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 MSL2Q9HCI7 577 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 PTTG3PQ9NZH4 202 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 FBXO9Q9UK97 447 aaPredicted RBP15.46■□□□□ 0.07
CLDND1-220ENST00000508902 OAZ3Q9UMX2 235 aa15.46■□□□□ 0.07
CLDND1-220ENST00000508902 CCDC182A6NF36 153 aa15.45■□□□□ 0.06
CLDND1-220ENST00000508902 SELENOFO60613 162 aa15.45■□□□□ 0.06
CLDND1-220ENST00000508902 GLCEO94923 617 aa15.45■□□□□ 0.06
CLDND1-220ENST00000508902 SPARCP09486 303 aa15.45■□□□□ 0.06
CLDND1-220ENST00000508902 IGHV4-31P0DP07 118 aa15.45■□□□□ 0.06
CLDND1-220ENST00000508902 KITLGP21583 273 aa15.45■□□□□ 0.06
CLDND1-220ENST00000508902 FMO3P31513 532 aa15.45■□□□□ 0.06
CLDND1-220ENST00000508902 CCL8P80075 99 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms