RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 ELOVL3Q9HB03 270 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 SDHAF2Q9NX18 166 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 B9D1Q9UPM9 204 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 HS3ST3B1Q9Y662 390 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 ZFHX4Q86UP3 3567 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 TRAV18A0A075B6X5 111 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 LOC102723996A0A087X1L8 192 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 A8MVM7 634 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 C9J4A7 227 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 OR6A2O95222 327 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 VSIG10L2P0DP72 767 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 COX6A1P12074 109 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 GABRA1P14867 456 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 RPA2P15927 270 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 FSTP19883 344 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 IL11P20809 199 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 RPL27P61353 136 aaKnown RBP9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 GK2Q14410 553 aaPredicted RBP9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 CSRP2Q16527 193 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 SGCBQ16585 318 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 WDR38Q5JTN6 314 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 C1orf140Q5VVS0 124 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 FAM166AQ6J272 317 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 STEAP1BQ6NZ63 245 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 LPCAT3Q6P1A2 487 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 CHMP1BQ7LBR1 199 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 OVCH2Q7RTZ1 564 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 HSD17B13Q7Z5P4 300 aaPredicted RBP9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 SLC38A6Q8IZM9 456 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 EIF4E3Q8N5X7 224 aaKnown RBP9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 GALNT11Q8NCW6 608 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 OR51D1Q8NGF3 324 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 OR6K3Q8NGY3 331 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 GPX8Q8TED1 209 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 TNFAIP8L1Q8WVP5 186 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 SYT4Q9H2B2 425 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 PARD6AQ9NPB6 346 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 VSX1Q9NZR4 365 aaPredicted RBP9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 DHDHQ9UQ10 334 aa9.85□□□□□ -0.83
SH3RF1-203ENST00000508685 CPAMD8Q8IZJ3 1885 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 LOC400499M0QZD8 3231 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 ANKUB1A6NFN9 424 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 H3BUI4 141 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 CDX4O14627 284 aaPredicted RBP9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 STK17BO94768 372 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 WNT11O96014 354 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 ITGB2P05107 769 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 LPLP06858 475 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 ZNF806P0C7X5 589 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 CRABP1P29762 137 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 CCKBRP32239 447 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 NUP62P37198 522 aaPredicted RBP9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 PTGDSP41222 190 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 KIR3DL2P43630 455 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 RPS18P62269 152 aaKnown RBP9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 STPG1Q5TH74 334 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 GSG1LQ6UXU4 331 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 GLRX5Q86SX6 157 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 CLEC1AQ8NC01 280 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 OR6M1Q8NGM8 313 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 OR2Y1Q8NGV0 311 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 RNF138Q8WVD3 245 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 FOXRED1Q96CU9 486 aaPredicted RBP9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 ARL5BQ96KC2 179 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 REG4Q9BYZ8 158 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 TXNIPQ9H3M7 391 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 EXO5Q9H790 373 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 METTL7AQ9H8H3 244 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 LOXL2Q9Y4K0 774 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 RALGAPA1Q6GYQ0 2036 aa9.84□□□□□ -0.83
SH3RF1-203ENST00000508685 A0A0D9SG52 128 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 PRSS37A4D1T9 235 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 RFPL4AA6NLU0 287 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 RFPL4AL1F8VTS6 287 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 ARPC5O15511 151 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 DKK1O94907 266 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 IGHMP01871 453 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 HLA-DQA2P01906 255 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 CYC1P08574 325 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 NMBP08949 121 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 FBXO45P0C2W1 286 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 TMIGD3P0DMS9 266 aaPredicted RBP9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 CD59P13987 128 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 NAGAP17050 411 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 PRKACBP22694 351 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 MAP2K6P52564 334 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 RIDAP52758 137 aaKnown RBP9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 FOXF1Q12946 379 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 MEP1BQ16820 701 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 DCAF12Q5T6F0 453 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 FAAP20Q6NZ36 180 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 PDZD9Q8IXQ8 264 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 PM20D2Q8IYS1 436 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 OR6S1Q8NH40 331 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 SLC22A8Q8TCC7 542 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 TMEM234Q8WY98 164 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 SPACA9Q96E40 222 aaPredicted RBP9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 WBP1Q96G27 269 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 ARL6Q9H0F7 186 aa9.83□□□□□ -0.84
SH3RF1-203ENST00000508685 ATG5Q9H1Y0 275 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms