RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ELOCQ15369 112 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 TPSAB1Q15661 275 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 NSUN5P1Q3KNT7 163 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 ZNF311Q5JNZ3 666 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 SPOPLQ6IQ16 392 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 ZNF621Q6ZSS3 439 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 PRSS41Q7RTY9 318 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 SNX32Q86XE0 403 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 CCDC112Q8NEF3 446 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 OR2L8Q8NGY9 312 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 ERMNQ8TAM6 284 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 PNPT1Q8TCS8 783 aaKnown RBP2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 ARPC1AQ92747 370 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 SLC6A7Q99884 636 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 GPR61Q9BZJ8 451 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 PLA2G12AQ9BZM1 189 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 ULBP1Q9BZM6 244 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 ATXN10Q9UBB4 475 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 TRAPPC4Q9Y296 219 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 ZNF835Q9Y2P0 537 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 V9GY05 133 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 SPTBP11277 2137 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 USF3Q68DE3 2245 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 ATP8B3O60423 1300 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 ABCA1O95477 2261 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 CHD3Q12873 2000 aaKnown RBP2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 E7ESA3 106 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 POLR1CO15160 346 aaPredicted RBP2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 CA1P00915 261 aaPredicted RBP2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 CAPN1P07384 714 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 CTSEP14091 401 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 ATP6V1B2P21281 511 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 ADRA1AP35348 466 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 CASP4P49662 377 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 KPNA2P52292 529 aaKnown RBP2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 HSF2Q03933 536 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 KLHL40Q2TBA0 621 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 GPRC6AQ5T6X5 926 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 CERS6Q6ZMG9 384 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 ZNF720Q7Z2F6 126 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 GKN2Q86XP6 184 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 KIR3DL3Q8N743 410 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 DENND6BQ8NEG7 585 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 OR6C4Q8NGE1 309 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 OR5L2Q8NGL0 311 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 OR6K2Q8NGY2 324 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 TCTEX1D2Q8WW35 142 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 ANKRD36BP1Q96IX9 119 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 TIPINQ9BVW5 301 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 SUDS3Q9H7L9 328 aaPredicted RBP2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 CALHM2Q9HA72 323 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 PARVGQ9HBI0 331 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 OPN4Q9UHM6 478 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 GNPTGQ9UJJ9 305 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 PCYT1BQ9Y5K3 369 aaPredicted RBP2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 HYDINQ4G0P3 5121 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 DOCK10Q96BY6 2186 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 ANKRD36A6QL64 1941 aa2.7□□□□□ -1.98
TOPBP1-206ENST00000508524 CHD5Q8TDI0 1954 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 A0A0G2JN53 185 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 TRIM64A6NGJ6 449 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 TRIM64BA6NI03 449 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 C21orf140B9A014 251 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 CPLX1O14810 134 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 ALOX12BO75342 701 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 SPAG7O75391 227 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 SPAG6O75602 509 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 CTAG2O75638 210 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 CD160O95971 181 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 PNMA6AP0CW24 399 aaPredicted RBP2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 TBXA2RP21731 343 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 SPAM1P38567 509 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 NMUP48645 174 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 EFNB2P52799 333 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 PPP1CAP62136 330 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 TNNC1P63316 161 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 EWSR1Q01844 656 aaKnown RBP eCLIP2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 TMEM255AQ5JRV8 349 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 C22orf39Q6P5X5 142 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 XKRXQ6PP77 449 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 BLOC1S2Q6QNY1 142 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 C16orf47Q6ZP98 133 aaPredicted RBP2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 TPRA1Q86W33 373 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 MISPQ8IVT2 679 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 RDH10Q8IZV5 341 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 ZNF615Q8N8J6 731 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 CYB561D1Q8N8Q1 229 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 NECAB1Q8N987 351 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 CATSPER1Q8NEC5 780 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 OR10G3Q8NGC4 313 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 SLC37A2Q8TED4 501 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 ST8SIA1Q92185 356 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 GSDMCQ9BYG8 508 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 C20orf85Q9H1P6 137 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 RHBGQ9H310 441 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 AGPAT4Q9NRZ5 378 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 SLC25A37Q9NYZ2 338 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 ODF2LQ9ULJ1 636 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 MGAT4BQ9UQ53 548 aa2.69□□□□□ -1.98
TOPBP1-206ENST00000508524 HS3ST2Q9Y278 367 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms