RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 TIMD4Q96H15 378 aa12.08□□□□□ -0.48
RAB28-205ENST00000508274 GAL3ST1Q99999 423 aa12.08□□□□□ -0.48
RAB28-205ENST00000508274 EGLN3Q9H6Z9 239 aa12.08□□□□□ -0.48
RAB28-205ENST00000508274 PTTG3PQ9NZH4 202 aa12.08□□□□□ -0.48
RAB28-205ENST00000508274 B9D1Q9UPM9 204 aa12.08□□□□□ -0.48
RAB28-205ENST00000508274 TRAV20A0A0B4J274 112 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 ARPC3O15145 178 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 TCF21O43680 179 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 CRABP1P29762 137 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 HIST1H3AP68431 136 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 SLC35F1Q5T1Q4 408 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 HIST2H3PS2Q5TEC6 136 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 DNM1P34Q6PK57 102 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 CFAP77Q6ZQR2 320 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 HIST2H3AQ71DI3 136 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 RFLNBQ8N5W9 214 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 FITM2Q8N6M3 262 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 ITLN1Q8WWA0 313 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 HAVCR1Q96D42 359 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 DIRC2Q96SL1 478 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 BTBD10Q9BSF8 475 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 UBAP1Q9NZ09 502 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 ATPIF1Q9UII2 106 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 TMCC3Q9ULS5 477 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 LYVE1Q9Y5Y7 322 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 ANK2Q01484 3957 aa12.07□□□□□ -0.48
RAB28-205ENST00000508274 LOC105371242A0A075B767 164 aa12.06□□□□□ -0.48
RAB28-205ENST00000508274 OR6C68A6NDL8 312 aa12.06□□□□□ -0.48
RAB28-205ENST00000508274 PNPP00491 289 aa12.06□□□□□ -0.48
RAB28-205ENST00000508274 RENP00797 406 aa12.06□□□□□ -0.48
RAB28-205ENST00000508274 NOS3P29474 1203 aa12.06□□□□□ -0.48
RAB28-205ENST00000508274 PRSS12P56730 875 aa12.06□□□□□ -0.48
RAB28-205ENST00000508274 COX10Q12887 443 aa12.06□□□□□ -0.48
RAB28-205ENST00000508274 PPP1R8Q12972 351 aaKnown RBP12.06□□□□□ -0.48
RAB28-205ENST00000508274 TSPAN31Q12999 210 aa12.06□□□□□ -0.48
RAB28-205ENST00000508274 RSPO1Q2MKA7 263 aaPredicted RBP12.06□□□□□ -0.48
RAB28-205ENST00000508274 CLEC12AQ5QGZ9 265 aa12.06□□□□□ -0.48
RAB28-205ENST00000508274 SHQ1Q6PI26 577 aaKnown RBP12.06□□□□□ -0.48
RAB28-205ENST00000508274 GJC3Q8NFK1 279 aa12.06□□□□□ -0.48
RAB28-205ENST00000508274 OR52E2Q8NGJ4 325 aa12.06□□□□□ -0.48
RAB28-205ENST00000508274 GNPDA2Q8TDQ7 276 aa12.06□□□□□ -0.48
RAB28-205ENST00000508274 DCLRE1CQ96SD1 692 aaKnown RBP12.06□□□□□ -0.48
RAB28-205ENST00000508274 TMPRSS13Q9BYE2 586 aa12.06□□□□□ -0.48
RAB28-205ENST00000508274 WDR76Q9H967 626 aa12.06□□□□□ -0.48
RAB28-205ENST00000508274 TMEM106BQ9NUM4 274 aa12.06□□□□□ -0.48
RAB28-205ENST00000508274 NDE1Q9NXR1 346 aa12.06□□□□□ -0.48
RAB28-205ENST00000508274 TCRBV5S2A0A599 114 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 RGS9O75916 674 aaPredicted RBP12.05□□□□□ -0.48
RAB28-205ENST00000508274 IGHV2-70P01814 119 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 ANPEPP15144 967 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 TUBG1P23258 451 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 IFNGR2P38484 337 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 LIPNQ5VXI9 398 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 OR2T2Q6IF00 324 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 ZBTB46Q86UZ6 589 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 OR10AD1Q8NGE0 317 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 PTP4A1Q93096 173 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 COG8Q96MW5 612 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 COQ7Q99807 217 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 PLA2G12AQ9BZM1 189 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 HDHD2Q9H0R4 259 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 TUBG2Q9NRH3 451 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 ACTR3BQ9P1U1 418 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 NPTNQ9Y639 398 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 B2RBV5 119 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 RAC2P15153 192 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 TNFSF4P23510 183 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 RPS27P42677 84 aaKnown RBP12.05□□□□□ -0.48
RAB28-205ENST00000508274 LCN2P80188 198 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.05□□□□□ -0.48
RAB28-205ENST00000508274 SLC3A1Q07837 685 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 SLC18B1Q6NT16 456 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 PGM2L1Q6PCE3 622 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 ZNF283Q8N7M2 679 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 CYB561A3Q8NBI2 242 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 BHLHE23Q8NDY6 225 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 OR4C15Q8NGM1 316 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 OR8D4Q8NGM9 314 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 APOBEC3DQ96AK3 386 aaPredicted RBP12.05□□□□□ -0.48
RAB28-205ENST00000508274 OR2V2Q96R30 315 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 SIGLEC11Q96RL6 698 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 CCT8L2Q96SF2 557 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 MRPL22Q9NWU5 206 aaKnown RBP12.05□□□□□ -0.48
RAB28-205ENST00000508274 VNN3Q9NY84 501 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 CDH10Q9Y6N8 788 aa12.05□□□□□ -0.48
RAB28-205ENST00000508274 IGHV3-64DA0A0J9YX35 117 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 H0YL77 283 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 J3QW42 95 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 TNFRSF11BO00300 401 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 BHLHE40O14503 412 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 VENTXO95231 258 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 HLA-DQA2P01906 255 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 SBK2P0C263 348 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 PSKH1P11801 424 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 ADRA2CP18825 462 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 PYCR1P32322 319 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 GGT2P36268 569 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 MAGEA2P43356 314 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 RGS6P49758 472 aa12.04□□□□□ -0.48
RAB28-205ENST00000508274 HMGA2P52926 109 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms