RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 BET1O15155 118 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 VAMP5O95183 116 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 WISP3O95389 354 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 HBE1P02100 147 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 MRPL3P09001 348 aaKnown RBP2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 CLTAP09496 248 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 SFTPCP11686 197 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 DTYMKP23919 212 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 TNFSF9P41273 254 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 LOXL1Q08397 574 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 ITIH4Q14624 930 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 CHRFAM7AQ494W8 412 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 C1orf185Q5T7R7 199 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 NTM-AS1Q6ZSK4 140 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 MICU2Q8IYU8 434 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 H1FOOQ8IZA3 346 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 COMMD1Q8N668 190 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 SNX31Q8N9S9 440 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 OR6Q1Q8NGQ2 317 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 COQ8AQ8NI60 647 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 SYNPRQ8TBG9 265 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 C15orf40Q8WUR7 153 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 FRZBQ92765 325 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 COL21A1Q96P44 957 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 TIMM17AQ99595 171 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 SLC7A5P2Q9GIP4 190 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 IQCGQ9H095 443 aaKnown RBP2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 EDA2RQ9HAV5 297 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 MRPS30Q9NP92 439 aaKnown RBP2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 TBC1D24Q9ULP9 559 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 SAR1BQ9Y6B6 198 aa2.44□□□□□ -2.02
HMGB1P28-201ENST00000507778 LRRIQ4A6NIV6 560 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 NCBP2LA6PVI3 153 aaKnown RBP2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 RAD51BO15315 384 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 YIF1AO95070 293 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 HLA-HP01893 362 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 CTSLP07711 333 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 RHOXF2BP0C7M4 288 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 CTRB1P17538 263 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 CSNK2A2P19784 350 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 SLC1A2P43004 574 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 CDKN2DP55273 166 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 PRR3P79522 188 aaKnown RBP2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 ART3Q13508 389 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 KIR2DS1Q14954 304 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 C5orf47Q569G3 176 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 BEX5Q5H9J7 111 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 AVPI1Q5T686 147 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 CALHM1Q8IU99 346 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 UBALD2Q8IYN6 164 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 FAM71AQ8IYT1 594 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 KATNAL2Q8IYT4 538 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 COX18Q8N8Q8 333 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 CAMK2N2Q96S95 79 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 FOXC2Q99958 501 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 ACP6Q9NPH0 428 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 MRPL22Q9NWU5 206 aaKnown RBP2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 PDP1Q9P0J1 537 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 RABL2AQ9UBK7 228 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 CAMTA1Q9Y6Y1 1673 aa2.43□□□□□ -2.02
HMGB1P28-201ENST00000507778 WDR19Q8NEZ3 1342 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 TRAV25A0A0B4J276 109 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 A0A0U1RQV1 116 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 TMEM223A0PJW6 202 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 TSPAN11A1L157 253 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 A6NDN8 102 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 ZNF705GA8MUZ8 300 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 GOLGA8TH3BQL2 631 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 H7C417 338 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 RTL8CO15255 209 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 RBFOX2O43251 390 aaKnown RBP eCLIP2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 GCM2O75603 506 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 SEMA3DO95025 777 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 ASGR1P07306 291 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 ADRA2AP08913 450 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 OR56A5P0C7T3 313 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 IL32P24001 234 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 RPS23P62266 143 aaKnown RBP2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 ZNF266Q14584 549 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 NCF4Q15080 339 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 SNRNP35Q16560 246 aaKnown RBP2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 SMUG1Q53HV7 270 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 TCEAL5Q5H9L2 206 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 ZNF684Q5T5D7 378 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 KHDRBS2Q5VWX1 349 aaKnown RBP2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 IGFL3Q6UXB1 125 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 WDR86Q86TI4 376 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 C11orf72Q8NBR9 251 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 OR11H7Q8NGC8 314 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 OR56A4Q8NGH8 313 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 OR52E5Q8NH55 327 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 OR51E1Q8TCB6 317 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 AGR3Q8TD06 166 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 TCEAL3Q969E4 200 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 DCPSQ96C86 337 aaKnown RBP2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 NRBF2Q96F24 287 aa2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 NARS2Q96I59 477 aaKnown RBP2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 JSRP1Q96MG2 331 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 HSD17B10Q99714 261 aaKnown RBP2.42□□□□□ -2.02
HMGB1P28-201ENST00000507778 SPIN2AQ99865 258 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms