RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 KRTAP27-1Q3LI81 207 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 WFDC8Q8IUA0 241 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 ZNF679Q8IYX0 411 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 SPARTQ8N0X7 666 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 KLHL36Q8N4N3 616 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 NANOGP1Q8N7R0 232 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 ZNF485Q8NCK3 441 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 TSPAN14Q8NG11 270 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 SPRYD4Q8WW59 207 aaPredicted RBP12.32□□□□□ -0.44
RNF4-208ENST00000507247 COQ7Q99807 217 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 MED18Q9BUE0 208 aa12.32□□□□□ -0.44
RNF4-208ENST00000507247 CHCHD3Q9NX63 227 aaKnown RBP12.32□□□□□ -0.44
RNF4-208ENST00000507247 LSM2Q9Y333 95 aaKnown RBP12.32□□□□□ -0.44
RNF4-208ENST00000507247 CAB39Q9Y376 341 aaPredicted RBP12.32□□□□□ -0.44
RNF4-208ENST00000507247 HECTD1Q9ULT8 2610 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 IGHV1-18A0A0C4DH31 117 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 IQCMA0A1B0GVH7 501 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 TMEM129A0AVI4 362 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 MAGEA13PA6NCF6 341 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 METTL15A6NJ78 407 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 J3QLW9 94 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 MYL12BO14950 172 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 SULT1C4O75897 302 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 SERPINA5P05154 406 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 KRT8P05787 483 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 H2BFMP0C1H6 154 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 CECR9P0C854 216 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 COX5BP10606 129 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 CCL2P13500 99 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 ZNF19P17023 458 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 PCMT1P22061 227 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 ANOS1P23352 680 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 STOMP27105 288 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 OTX1P32242 354 aaPredicted RBP12.31□□□□□ -0.44
RNF4-208ENST00000507247 ZNF83P51522 516 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 ACTA2P62736 377 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 ACTG2P63267 376 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 EMX1Q04741 257 aaPredicted RBP12.31□□□□□ -0.44
RNF4-208ENST00000507247 PLP2Q04941 152 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 TBCEQ15813 527 aaPredicted RBP12.31□□□□□ -0.44
RNF4-208ENST00000507247 C1QTNF12Q5T7M4 302 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 RHOUQ7L0Q8 258 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 ALDH16A1Q8IZ83 802 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 SYS1Q8N2H4 156 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 FAM169BQ8N8A8 192 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 YIPF7Q8N8F6 280 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 OR52N1Q8NH53 320 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 RNF166Q96A37 237 aaPredicted RBP12.31□□□□□ -0.44
RNF4-208ENST00000507247 PELI1Q96FA3 418 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 POM121L2Q96KW2 1035 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 OR5M11Q96RB7 305 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 KCNJ15Q99712 375 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 MROQ9BYG7 248 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 ACOT13Q9NPJ3 140 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 ACOXLQ9NUZ1 547 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 ATPIF1Q9UII2 106 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 GNG8Q9UK08 70 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 ERGIC3Q9Y282 383 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 SNX5Q9Y5X3 404 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 COL12A1Q99715 3063 aa12.31□□□□□ -0.44
RNF4-208ENST00000507247 DOPEY2Q9Y3R5 2298 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 FLNCQ14315 2725 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 A0A087WXM4 84 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 TRIM64CA6NLI5 447 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 F5H5K5 113 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 M0R1B8 84 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 ZNF254O75437 659 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 SRSF10O75494 262 aaKnown RBP12.3□□□□□ -0.44
RNF4-208ENST00000507247 RPP14O95059 124 aaKnown RBP12.3□□□□□ -0.44
RNF4-208ENST00000507247 LALBAP00709 142 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 LCKP06239 509 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 IGFBP2P18065 325 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 PSMB10P40306 273 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 PRKXP51817 358 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 RIDAP52758 137 aaKnown RBP12.3□□□□□ -0.44
RNF4-208ENST00000507247 WNT4P56705 351 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 GRB2P62993 217 aaKnown RBP12.3□□□□□ -0.44
RNF4-208ENST00000507247 GALK2Q01415 458 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 MFGE8Q08431 387 aaPredicted RBP12.3□□□□□ -0.44
RNF4-208ENST00000507247 ECH1Q13011 328 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 TAF13Q15543 124 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 LIPNQ5VXI9 398 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 DEGS2Q6QHC5 323 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 FAM220AQ7Z4H9 259 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 NAA40Q86UY6 237 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.3□□□□□ -0.44
RNF4-208ENST00000507247 PAQR4Q8N4S7 273 aaPredicted RBP12.3□□□□□ -0.44
RNF4-208ENST00000507247 SVOPQ8N4V2 548 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 SLC30A7Q8NEW0 376 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 GATAD2BQ8WXI9 593 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 MRPL48Q96GC5 212 aaKnown RBP12.3□□□□□ -0.44
RNF4-208ENST00000507247 MND1Q9BWT6 205 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 HEATR1Q9H583 2144 aaKnown RBP12.3□□□□□ -0.44
RNF4-208ENST00000507247 NDRG3Q9UGV2 375 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 GRIP1Q9Y3R0 1128 aa12.3□□□□□ -0.44
RNF4-208ENST00000507247 C5orf49A4QMS7 147 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 TUBAL3A6NHL2 446 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 E9PI62 339 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 M0R135 149 aa12.29□□□□□ -0.44
RNF4-208ENST00000507247 PNPP00491 289 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms