RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 IL1RAPQ9NPH3 570 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 TMEM106BQ9NUM4 274 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 UBAP1Q9NZ09 502 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 PTTG3PQ9NZH4 202 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 TAGLN3Q9UI15 199 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 MAGEL2Q9UJ55 1249 aa12.14□□□□□ -0.47
CDC42SE2-209ENST00000506419 TENM1Q9UKZ4 2725 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 ISPDA4D126 451 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 H0YL77 283 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 OR10H3O60404 316 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 RGS9O75916 674 aaPredicted RBP12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 RAC2P15153 192 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 CRABP1P29762 137 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 RRM2P31350 389 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 SLC6A6P31641 620 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 HMGA2P52926 109 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 GNGT1P63211 74 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 FBXW12Q6X9E4 464 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 COLCA1Q6ZS62 124 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 ZBTB46Q86UZ6 589 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 GJC3Q8NFK1 279 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 SLC26A10Q8NG04 563 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 FANK1Q8TC84 345 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 GNPDA2Q8TDQ7 276 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 ZNRF4Q8WWF5 429 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 SIGLEC11Q96RL6 698 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 COQ7Q99807 217 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 IFT27Q9BW83 186 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 MMP26Q9NRE1 261 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 ARL2BPQ9Y2Y0 163 aa12.13□□□□□ -0.47
CDC42SE2-209ENST00000506419 A0A0A6YYJ9 748 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 A0A0G2JMP0 313 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 A0A0X1KG70 313 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 TRAPPC2LH3BP13 241 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 FABP3P05413 133 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 GGT2P36268 569 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 COX10Q12887 443 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 TSPAN31Q12999 210 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 ZMAT1Q5H9K5 638 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 ZNF362Q5T0B9 420 aaPredicted RBP12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 SLC35F1Q5T1Q4 408 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 DCAF12L2Q5VW00 463 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 SLC18B1Q6NT16 456 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 PGBD2Q6P3X8 592 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 SHQ1Q6PI26 577 aaKnown RBP12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 CFAP77Q6ZQR2 320 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 C1QL2Q7Z5L3 287 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 LINC00346Q8IVM7 164 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 ZDHHC21Q8IVQ6 265 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 DEFB107AQ8IZN7 70 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 ATG16L2Q8NAA4 619 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 OR4M2Q8NGB6 313 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 MCUR1Q96AQ8 359 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 COG8Q96MW5 612 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 OR2V2Q96R30 315 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 NSRP1Q9H0G5 558 aaKnown RBP12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 FN3KQ9H479 309 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 C7orf69Q9H7B7 122 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 WDR76Q9H967 626 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 KRCC1Q9NPI7 259 aaPredicted RBP12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 RPRD1BQ9NQG5 326 aaKnown RBP12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 MRPL22Q9NWU5 206 aaKnown RBP12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 IL19Q9UHD0 177 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 ATPIF1Q9UII2 106 aa12.12□□□□□ -0.47
CDC42SE2-209ENST00000506419 WNK2Q9Y3S1 2297 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 TMEM178BH3BS89 294 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 J3QLI3 93 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 IDH3BO43837 385 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 RENP00797 406 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 EPHA1P21709 976 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 TNFSF4P23510 183 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 PMELP40967 661 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 SLC6A9P48067 706 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 RGS6P49758 472 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 PRSS12P56730 875 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 SEC61A1P61619 476 aaKnown RBP12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 ZMYND11Q15326 602 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 DNM1P34Q6PK57 102 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 CYP2R1Q6VVX0 501 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 PEG10Q86TG7 708 aaKnown RBP12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 JAZF1Q86VZ6 243 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 SDR9C7Q8NEX9 313 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 OR8G5Q8NG78 346 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 OR52E2Q8NGJ4 325 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 OR5L1Q8NGL2 311 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 OR4C15Q8NGM1 316 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 ZNF420Q8TAQ5 688 aaPredicted RBP12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 APOBEC3DQ96AK3 386 aaPredicted RBP12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 C1QTNF5Q9BXJ0 243 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 EGLN3Q9H6Z9 239 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 PATZ1Q9HBE1 687 aaKnown RBP12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 GCM1Q9NP62 436 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 PNRC2Q9NPJ4 139 aaKnown RBP12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 CYB5R1Q9UHQ9 305 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 TMCC3Q9ULS5 477 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 PCDHB10Q9UN67 800 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 PPP1R3CQ9UQK1 317 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 POLR1DQ9Y2S0 133 aa12.11□□□□□ -0.47
CDC42SE2-209ENST00000506419 IGHV3-64DA0A0J9YX35 117 aa12.1□□□□□ -0.47
CDC42SE2-209ENST00000506419 J3QW42 95 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms