RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ZNF260Q3ZCT1 412 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 LBHQ53QV2 105 aaPredicted RBP14.29□□□□□ -0.12
SCLT1-208ENST00000506368 ALG10Q5BKT4 473 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 EEF1A1P5Q5VTE0 462 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 MDGA2Q7Z553 956 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 RRNAD1Q96FB5 475 aaKnown RBP14.29□□□□□ -0.12
SCLT1-208ENST00000506368 DPP7Q9UHL4 492 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 STARD10Q9Y365 291 aa14.29□□□□□ -0.12
SCLT1-208ENST00000506368 A0A087WV48 116 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 TBC1D3DA0A087WVF3 549 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 TBC1D3LB9A6J9 549 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 NDUFS6O75380 124 aaKnown RBP14.28□□□□□ -0.12
SCLT1-208ENST00000506368 JTBO76095 146 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 PLGP00747 810 aaPredicted RBP14.28□□□□□ -0.12
SCLT1-208ENST00000506368 CISD3P0C7P0 127 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 PEBP1P30086 187 aaKnown RBP14.28□□□□□ -0.12
SCLT1-208ENST00000506368 TDGQ13569 410 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 GPR18Q14330 331 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 ZNF239Q16600 458 aaKnown RBP14.28□□□□□ -0.12
SCLT1-208ENST00000506368 GLYATL3Q5SZD4 288 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 TBC1D3CQ6IPX1 549 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 CD163Q86VB7 1156 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 HOGA1Q86XE5 327 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 ZNF679Q8IYX0 411 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 TBC1D3Q8IZP1 549 aaPredicted RBP14.28□□□□□ -0.12
SCLT1-208ENST00000506368 CASTOR1Q8WTX7 329 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 GTF3AQ92664 365 aaKnown RBP14.28□□□□□ -0.12
SCLT1-208ENST00000506368 CPNE4Q96A23 557 aaPredicted RBP14.28□□□□□ -0.12
SCLT1-208ENST00000506368 MRGPRFQ96AM1 343 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 SLC22A18Q96BI1 424 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 LMF1Q96S06 567 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 CDCA3Q99618 268 aaPredicted RBP14.28□□□□□ -0.12
SCLT1-208ENST00000506368 SMDT1Q9H4I9 107 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 GRHPRQ9UBQ7 328 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 GTF2A1LQ9UNN4 478 aa14.28□□□□□ -0.12
SCLT1-208ENST00000506368 ARGFXA6NJG6 315 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 PCCBP05166 539 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 HOXB5P09067 269 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 NQO2P16083 231 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 HOXA5P20719 270 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 GPX4P36969 197 aaPredicted RBP14.27□□□□□ -0.12
SCLT1-208ENST00000506368 LPAR6P43657 344 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 UCP2P55851 309 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 FAM3AP98173 230 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 AWAT1Q58HT5 328 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 KCTD18Q6PI47 426 aaPredicted RBP14.27□□□□□ -0.12
SCLT1-208ENST00000506368 FJX1Q86VR8 437 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 OR4N5Q8IXE1 308 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 ARRDC1Q8N5I2 433 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 OR56B1Q8NGI3 324 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 FAM174AQ8TBP5 190 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 FAM46BQ96A09 425 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 KXD1Q9BQD3 176 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 G6PC3Q9BUM1 346 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 OR1A2Q9Y585 309 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 COLEC10Q9Y6Z7 277 aa14.27□□□□□ -0.12
SCLT1-208ENST00000506368 A0A1W2PPE3 182 aa14.27□□□□□ -0.13
SCLT1-208ENST00000506368 H0YIZ8 118 aa14.27□□□□□ -0.13
SCLT1-208ENST00000506368 SFT2D2O95562 160 aa14.27□□□□□ -0.13
SCLT1-208ENST00000506368 S100A2P29034 98 aa14.27□□□□□ -0.13
SCLT1-208ENST00000506368 CDX1P47902 265 aaPredicted RBP14.27□□□□□ -0.13
SCLT1-208ENST00000506368 CTXN1P60606 82 aa14.27□□□□□ -0.13
SCLT1-208ENST00000506368 ROM1Q03395 351 aa14.27□□□□□ -0.13
SCLT1-208ENST00000506368 MGAT2Q10469 447 aa14.27□□□□□ -0.13
SCLT1-208ENST00000506368 RUNX2Q13950 521 aa14.27□□□□□ -0.13
SCLT1-208ENST00000506368 ZNF74Q16587 644 aa14.27□□□□□ -0.13
SCLT1-208ENST00000506368 DPY19L4Q7Z388 723 aa14.27□□□□□ -0.13
SCLT1-208ENST00000506368 TRAPPC6BQ86SZ2 158 aa14.27□□□□□ -0.13
SCLT1-208ENST00000506368 ASB5Q8WWX0 329 aa14.27□□□□□ -0.13
SCLT1-208ENST00000506368 AKR1E2Q96JD6 320 aa14.27□□□□□ -0.13
SCLT1-208ENST00000506368 C2orf50Q96LR7 162 aa14.27□□□□□ -0.13
SCLT1-208ENST00000506368 PDE7BQ9NP56 450 aa14.27□□□□□ -0.13
SCLT1-208ENST00000506368 FAM171A2A8MVW0 826 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 SMAD9O15198 467 aaKnown RBP14.26□□□□□ -0.13
SCLT1-208ENST00000506368 LRP3O75074 770 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 RHOP08100 348 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 AKR1C4P17516 323 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 METAP1P53582 386 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 SRSF5Q13243 272 aaKnown RBP14.26□□□□□ -0.13
SCLT1-208ENST00000506368 KLHL26Q53HC5 615 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 KRBOX4Q5JUW0 171 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 NSUN5P2Q63ZY6 315 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 OPN5Q6U736 354 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 TMEM184AQ6ZMB5 413 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 PLPP7Q8NBV4 271 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 RNASE11Q8TAA1 199 aaKnown RBP14.26□□□□□ -0.13
SCLT1-208ENST00000506368 NUBPLQ8TB37 319 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 BCO1Q9HAY6 547 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 TMEM184BQ9Y519 407 aaPredicted RBP14.26□□□□□ -0.13
SCLT1-208ENST00000506368 TRBV23-1A0A0A0MS06 115 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 A0A1B0GTH9 108 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 TMEM235A6NFC5 223 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 PRR19A6NJB7 356 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 OR52A4PA6NMU1 304 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 TFF2Q03403 129 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 VAX1Q5SQQ9 334 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 TMEM268Q5VZI3 342 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 SLC18B1Q6NT16 456 aa14.26□□□□□ -0.13
SCLT1-208ENST00000506368 GRASPQ7Z6J2 395 aaPredicted RBP14.26□□□□□ -0.13
SCLT1-208ENST00000506368 TMEM151BQ8IW70 566 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms