RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 NKPD1Q17RQ9 610 aa17.72■□□□□ 0.43
DDR1-255ENST00000504927 LINC01590Q5TEZ4 76 aa17.72■□□□□ 0.43
DDR1-255ENST00000504927 TMEM236Q5W0B7 351 aa17.72■□□□□ 0.43
DDR1-255ENST00000504927 CFAP77Q6ZQR2 320 aa17.72■□□□□ 0.43
DDR1-255ENST00000504927 OR5L1Q8NGL2 311 aa17.72■□□□□ 0.43
DDR1-255ENST00000504927 KLF14Q8TD94 323 aaPredicted RBP17.72■□□□□ 0.43
DDR1-255ENST00000504927 ATF6BQ99941 703 aa17.72■□□□□ 0.43
DDR1-255ENST00000504927 PKP2Q99959 881 aa17.72■□□□□ 0.43
DDR1-255ENST00000504927 RBM4BQ9BQ04 359 aaKnown RBP17.72■□□□□ 0.43
DDR1-255ENST00000504927 HCAR1Q9BXC0 346 aa17.72■□□□□ 0.43
DDR1-255ENST00000504927 OR2J1Q9GZK6 312 aa17.72■□□□□ 0.43
DDR1-255ENST00000504927 WDR76Q9H967 626 aa17.72■□□□□ 0.43
DDR1-255ENST00000504927 TVP23BQ9NYZ1 205 aa17.72■□□□□ 0.43
DDR1-255ENST00000504927 COMMD3-BMI1R4GMX3 469 aa17.72■□□□□ 0.43
DDR1-255ENST00000504927 H7C1Q1 480 aa17.71■□□□□ 0.43
DDR1-255ENST00000504927 PRODHO43272 600 aa17.71■□□□□ 0.43
DDR1-255ENST00000504927 INHBBP09529 407 aa17.71■□□□□ 0.43
DDR1-255ENST00000504927 IGFBP5P24593 272 aa17.71■□□□□ 0.43
DDR1-255ENST00000504927 ALDH3B1P43353 468 aa17.71■□□□□ 0.43
DDR1-255ENST00000504927 KRTAP27-1Q3LI81 207 aa17.71■□□□□ 0.43
DDR1-255ENST00000504927 SLC35D3Q5M8T2 416 aa17.71■□□□□ 0.43
DDR1-255ENST00000504927 PLBD1Q6P4A8 553 aa17.71■□□□□ 0.43
DDR1-255ENST00000504927 RFPL4BQ6ZWI9 263 aa17.71■□□□□ 0.43
DDR1-255ENST00000504927 CPOQ8IVL8 374 aa17.71■□□□□ 0.43
DDR1-255ENST00000504927 ZCCHC24Q8N2G6 241 aaKnown RBP17.71■□□□□ 0.43
DDR1-255ENST00000504927 SNX33Q8WV41 574 aa17.71■□□□□ 0.43
DDR1-255ENST00000504927 SLC7A6Q92536 515 aa17.71■□□□□ 0.43
DDR1-255ENST00000504927 FAM168AQ92567 244 aa17.71■□□□□ 0.43
DDR1-255ENST00000504927 APOBEC3DQ96AK3 386 aaPredicted RBP17.71■□□□□ 0.43
DDR1-255ENST00000504927 OR51V1Q9H2C8 321 aa17.71■□□□□ 0.43
DDR1-255ENST00000504927 MED20Q9H944 212 aa17.71■□□□□ 0.43
DDR1-255ENST00000504927 MARCH7Q9H992 704 aa17.71■□□□□ 0.43
DDR1-255ENST00000504927 MYEF2Q9P2K5 600 aaKnown RBP17.71■□□□□ 0.43
DDR1-255ENST00000504927 ARFGEF3Q5TH69 2177 aa17.7■□□□□ 0.42
DDR1-255ENST00000504927 ZFHX3Q15911 3703 aa17.7■□□□□ 0.42
DDR1-255ENST00000504927 NDUFS8O00217 210 aa17.7■□□□□ 0.42
DDR1-255ENST00000504927 MITFO75030 526 aaPredicted RBP17.7■□□□□ 0.42
DDR1-255ENST00000504927 DBHP09172 617 aa17.7■□□□□ 0.42
DDR1-255ENST00000504927 PDLIM4P50479 330 aa17.7■□□□□ 0.42
DDR1-255ENST00000504927 RSPO1Q2MKA7 263 aaPredicted RBP17.7■□□□□ 0.42
DDR1-255ENST00000504927 SPATA46Q5T0L3 261 aa17.7■□□□□ 0.42
DDR1-255ENST00000504927 TMEM154Q6P9G4 183 aa17.7■□□□□ 0.42
DDR1-255ENST00000504927 SHFQ7M4L6 423 aa17.7■□□□□ 0.42
DDR1-255ENST00000504927 ZNF525Q8N782 197 aa17.7■□□□□ 0.42
DDR1-255ENST00000504927 SPTSSAQ969W0 71 aa17.7■□□□□ 0.42
DDR1-255ENST00000504927 MAP6Q96JE9 813 aa17.7■□□□□ 0.42
DDR1-255ENST00000504927 COX4I2Q96KJ9 171 aa17.7■□□□□ 0.42
DDR1-255ENST00000504927 INTS14Q96SY0 518 aa17.7■□□□□ 0.42
DDR1-255ENST00000504927 S100A14Q9HCY8 104 aa17.7■□□□□ 0.42
DDR1-255ENST00000504927 PNRC2Q9NPJ4 139 aaKnown RBP17.7■□□□□ 0.42
DDR1-255ENST00000504927 HINT3Q9NQE9 182 aaKnown RBP17.7■□□□□ 0.42
DDR1-255ENST00000504927 CYSLTR2Q9NS75 346 aa17.7■□□□□ 0.42
DDR1-255ENST00000504927 CGGBP1Q9UFW8 167 aaPredicted RBP17.7■□□□□ 0.42
DDR1-255ENST00000504927 STARD10Q9Y365 291 aa17.7■□□□□ 0.42
DDR1-255ENST00000504927 LOC390937A0A1W2PQ73 354 aa17.69■□□□□ 0.42
DDR1-255ENST00000504927 ZAR1LA6NP61 321 aa17.69■□□□□ 0.42
DDR1-255ENST00000504927 SPARCP09486 303 aa17.69■□□□□ 0.42
DDR1-255ENST00000504927 TPTEP56180 551 aa17.69■□□□□ 0.42
DDR1-255ENST00000504927 PPP2R2BQ00005 443 aa17.69■□□□□ 0.42
DDR1-255ENST00000504927 PCGF3Q3KNV8 242 aa17.69■□□□□ 0.42
DDR1-255ENST00000504927 LYPD4Q6UWN0 246 aa17.69■□□□□ 0.42
DDR1-255ENST00000504927 DCXRQ7Z4W1 244 aa17.69■□□□□ 0.42
DDR1-255ENST00000504927 BIVMQ86UB2 503 aa17.69■□□□□ 0.42
DDR1-255ENST00000504927 CIB1Q99828 191 aa17.69■□□□□ 0.42
DDR1-255ENST00000504927 REG4Q9BYZ8 158 aa17.69■□□□□ 0.42
DDR1-255ENST00000504927 DDX28Q9NUL7 540 aaKnown RBP17.69■□□□□ 0.42
DDR1-255ENST00000504927 TMEFF2Q9UIK5 374 aaPredicted RBP17.69■□□□□ 0.42
DDR1-255ENST00000504927 PLSCR5A0PG75 271 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 SAC3D1A6NKF1 404 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 C17orf100A8MU93 164 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 F5H5K5 113 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 NAT2P11245 290 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 SLC25A16P16260 332 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 MPV17P39210 176 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 MAD2L1BPQ15013 274 aaPredicted RBP17.68■□□□□ 0.42
DDR1-255ENST00000504927 KLHL12Q53G59 568 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 SLX4IPQ5VYV7 408 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 COLCA1Q6ZS62 124 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 RHOUQ7L0Q8 258 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 CXXC5Q7LFL8 322 aaKnown RBP17.68■□□□□ 0.42
DDR1-255ENST00000504927 ERI1Q8IV48 349 aaKnown RBP17.68■□□□□ 0.42
DDR1-255ENST00000504927 CIARTQ8N365 385 aaPredicted RBP17.68■□□□□ 0.42
DDR1-255ENST00000504927 ZNF540Q8NDQ6 660 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 C10orf105Q8TEF2 133 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 UBASH3BQ8TF42 649 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 HAVCR1Q96D42 359 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 C1QTNF5Q9BXJ0 243 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 TPK1Q9H3S4 243 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 NKIRAS2Q9NYR9 191 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 ORC6Q9Y5N6 252 aa17.68■□□□□ 0.42
DDR1-255ENST00000504927 LY6HO94772 140 aa17.67■□□□□ 0.42
DDR1-255ENST00000504927 ACSM4P0C7M7 580 aa17.67■□□□□ 0.42
DDR1-255ENST00000504927 DAOP14920 347 aa17.67■□□□□ 0.42
DDR1-255ENST00000504927 RPS27P42677 84 aaKnown RBP17.67■□□□□ 0.42
DDR1-255ENST00000504927 SLC15A1P46059 708 aa17.67■□□□□ 0.42
DDR1-255ENST00000504927 TAF13Q15543 124 aa17.67■□□□□ 0.42
DDR1-255ENST00000504927 ZMAT1Q5H9K5 638 aa17.67■□□□□ 0.42
DDR1-255ENST00000504927 TIGD4Q8IY51 512 aa17.67■□□□□ 0.42
DDR1-255ENST00000504927 ZNF786Q8N393 782 aa17.67■□□□□ 0.42
DDR1-255ENST00000504927 ZNF454Q8N9F8 522 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms