RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 KCNE4Q8WWG9 221 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 SLC6A15Q9H2J7 730 aa12.65□□□□□ -0.38
TCOF1-207ENST00000504761 IGLV3-19P01714 112 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 GALNSP34059 522 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 BDH1Q02338 343 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 IKZF1Q13422 519 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 FAAP20Q6NZ36 180 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 SIAEQ9HAT2 523 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 TIMM10BQ9Y5J6 103 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 R4GMQ9 66 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 TMEM235A6NFC5 223 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 TTLL8A6PVC2 850 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 B4DXG7 233 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 ITGB2P05107 769 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 PTHLHP12272 177 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 HLA-DOBP13765 273 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 IRF2P14316 349 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 BAK1Q16611 211 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 ZNF318Q5VUA4 2279 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 MEX3BQ6ZN04 569 aaKnown RBP12.64□□□□□ -0.39
TCOF1-207ENST00000504761 NOXO1Q8NFA2 376 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 STEAP2Q8NFT2 490 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 SEMA6DQ8NFY4 1073 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 OR10D3Q8NH80 312 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 GIMAP1Q8WWP7 306 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 JAM3Q9BX67 310 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 KCNIP1Q9NZI2 227 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 ZNF766Q5HY98 468 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 WDR38Q5JTN6 314 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 ADGRE4PQ86SQ3 457 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 CMTM4Q8IZR5 234 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 OR56B1Q8NGI3 324 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 RANBP3Q9H6Z4 567 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-207ENST00000504761 ALG5Q9Y673 324 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 BET1O15155 118 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 TIMM8AO60220 97 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-207ENST00000504761 FAM157BP0CG42 384 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 PRKACBP22694 351 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 EVX1P49640 407 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 C3AR1Q16581 482 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 MESTQ5EB52 335 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 ZNF770Q6IQ21 691 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-207ENST00000504761 Q6ZNX1 250 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 NPEPL1Q8NDH3 523 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 OR1M1Q8NGA1 313 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 COQ8AQ8NI60 647 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 CLDN23Q96B33 292 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 COPS3Q9UNS2 423 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 SPEF1Q9Y4P9 236 aa12.64□□□□□ -0.39
TCOF1-207ENST00000504761 TRGV5A0A0B4J1U4 118 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 H7C417 338 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 RAF1P04049 648 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 PNLIPP16233 465 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 PVALBP20472 110 aaPredicted RBP12.63□□□□□ -0.39
TCOF1-207ENST00000504761 DOK3Q7L591 496 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.63□□□□□ -0.39
TCOF1-207ENST00000504761 OR4K15Q8NH41 348 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 ZPLD1Q8TCW7 415 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 INTS12Q96CB8 462 aaKnown RBP12.63□□□□□ -0.39
TCOF1-207ENST00000504761 RAB33BQ9H082 229 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 CCDC86Q9H6F5 360 aaKnown RBP12.63□□□□□ -0.39
TCOF1-207ENST00000504761 RABL2AQ9UBK7 228 aaPredicted RBP12.63□□□□□ -0.39
TCOF1-207ENST00000504761 RABL2BQ9UNT1 228 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 DOCK9Q9BZ29 2069 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 A0A1W2PR80 420 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 SLC22A20A6NK97 555 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 TCRBP04435 133 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 EPXP11678 715 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 MEOX1P50221 254 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 AKR1C2P52895 323 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 LTC4SQ16873 150 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 GDPD3Q7L5L3 318 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 SLC38A9Q8NBW4 561 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 OR5H6Q8NGV6 325 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 WASF3Q9UPY6 502 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 ZNF175Q9Y473 711 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 MRPS18BQ9Y676 258 aaKnown RBP12.63□□□□□ -0.39
TCOF1-207ENST00000504761 MN1Q10571 1320 aaPredicted RBP12.63□□□□□ -0.39
TCOF1-207ENST00000504761 LNP1A1A4G5 178 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 AIPO00170 330 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 GRPP07492 148 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 FAHP16930 419 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 UQCRC1P31930 480 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 SLC25A1P53007 311 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 SLC9A3R2Q15599 337 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 C2orf76Q3KRA6 126 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 SARAFQ96BY9 339 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 CTHRC1Q96CG8 243 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 UCN2Q96RP3 112 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 PRRT1Q99946 306 aa12.63□□□□□ -0.39
TCOF1-207ENST00000504761 SPTBN1Q01082 2364 aaKnown RBP12.62□□□□□ -0.39
TCOF1-207ENST00000504761 MKRN2OSH3BPM6 223 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 LALBAP00709 142 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 HLA-AP01891 365 aaKnown RBP12.62□□□□□ -0.39
TCOF1-207ENST00000504761 SDHBP21912 280 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 S100A1P23297 94 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 SHBQ15464 509 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 STEAP1BQ6NZ63 245 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 ANKRD16Q6P6B7 361 aa12.62□□□□□ -0.39
TCOF1-207ENST00000504761 PSMF1Q92530 271 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms