RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 NIPSNAP1Q9BPW8 284 aa12.14□□□□□ -0.47
HOXC9-202ENST00000504557 WACQ9BTA9 647 aa12.14□□□□□ -0.47
HOXC9-202ENST00000504557 SHARPINQ9H0F6 387 aa12.14□□□□□ -0.47
HOXC9-202ENST00000504557 RACGAP1Q9H0H5 632 aa12.14□□□□□ -0.47
HOXC9-202ENST00000504557 WDR76Q9H967 626 aa12.14□□□□□ -0.47
HOXC9-202ENST00000504557 ARHGAP32A7KAX9 2087 aa12.14□□□□□ -0.47
HOXC9-202ENST00000504557 OR6C6A6NF89 314 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 F5H5K5 113 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 H3BN98 237 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 BHLHE40O14503 412 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 IDH3BO43837 385 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 E2F6O75461 281 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 TACSTD2P09758 323 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 ZNF823P16415 610 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 POU1F1P28069 291 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 MMP15P51511 669 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 TRAP1Q12931 704 aaKnown RBP12.13□□□□□ -0.47
HOXC9-202ENST00000504557 PSG7Q13046 419 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 KCNMB1Q16558 191 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 SLC36A3Q495N2 470 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 SPRNQ5BIV9 151 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 PGM2L1Q6PCE3 622 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 IQCF1Q8N6M8 205 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 SLC37A3Q8NCC5 494 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 OR2Z1Q8NG97 314 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 OR4Q3Q8NH05 313 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 GIPC3Q8TF64 312 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 CCL17Q92583 94 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 SLC7A6OSQ96CW6 309 aaPredicted RBP12.13□□□□□ -0.47
HOXC9-202ENST00000504557 TBCCD1Q9NVR7 557 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 WNK2Q9Y3S1 2297 aa12.13□□□□□ -0.47
HOXC9-202ENST00000504557 ISPDA4D126 451 aa12.12□□□□□ -0.47
HOXC9-202ENST00000504557 RP2O75695 350 aa12.12□□□□□ -0.47
HOXC9-202ENST00000504557 DNAJC8O75937 253 aaPredicted RBP12.12□□□□□ -0.47
HOXC9-202ENST00000504557 CLUP10909 449 aa12.12□□□□□ -0.47
HOXC9-202ENST00000504557 TNFAIP6P98066 277 aaPredicted RBP12.12□□□□□ -0.47
HOXC9-202ENST00000504557 CRMP1Q14194 572 aa12.12□□□□□ -0.47
HOXC9-202ENST00000504557 HFEQ30201 348 aa12.12□□□□□ -0.47
HOXC9-202ENST00000504557 TMEM179BQ7Z7N9 219 aa12.12□□□□□ -0.47
HOXC9-202ENST00000504557 ZBTB46Q86UZ6 589 aa12.12□□□□□ -0.47
HOXC9-202ENST00000504557 HS3ST5Q8IZT8 346 aa12.12□□□□□ -0.47
HOXC9-202ENST00000504557 OR6K6Q8NGW6 343 aa12.12□□□□□ -0.47
HOXC9-202ENST00000504557 TEX47Q8TBZ9 253 aa12.12□□□□□ -0.47
HOXC9-202ENST00000504557 ZNRF4Q8WWF5 429 aa12.12□□□□□ -0.47
HOXC9-202ENST00000504557 FEVQ99581 238 aa12.12□□□□□ -0.47
HOXC9-202ENST00000504557 EGLN1Q9GZT9 426 aa12.12□□□□□ -0.47
HOXC9-202ENST00000504557 HDHD2Q9H0R4 259 aa12.12□□□□□ -0.47
HOXC9-202ENST00000504557 MRPL22Q9NWU5 206 aaKnown RBP12.12□□□□□ -0.47
HOXC9-202ENST00000504557 IL20Q9NYY1 176 aa12.12□□□□□ -0.47
HOXC9-202ENST00000504557 PDP1Q9P0J1 537 aaPredicted RBP12.12□□□□□ -0.47
HOXC9-202ENST00000504557 PURGQ9UJV8 347 aaKnown RBP12.12□□□□□ -0.47
HOXC9-202ENST00000504557 CDC42EP3Q9UKI2 254 aa12.12□□□□□ -0.47
HOXC9-202ENST00000504557 N6AMT1Q9Y5N5 214 aa12.12□□□□□ -0.47
HOXC9-202ENST00000504557 IGHV3-64DA0A0J9YX35 117 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 AQP12BA6NM10 295 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 CLDN25C9JDP6 229 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 SPARCP09486 303 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 CRYBB2P43320 205 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 TMEM33P57088 247 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 CBX1P83916 185 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 COX10Q12887 443 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 CR1LQ2VPA4 569 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 ZMAT1Q5H9K5 638 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 FAM120AOSQ5T036 256 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 OR2T2Q6IF00 324 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 SLC18B1Q6NT16 456 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 SPATC1Q76KD6 591 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 AQP12AQ8IXF9 295 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 C1orf174Q8IYL3 243 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 LINC01356Q8N9X3 169 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 ZNF511Q8NB15 262 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 BHLHE23Q8NDY6 225 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 OR2T33Q8NG76 320 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 OR2T4Q8NH00 348 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 ELMOD3Q96FG2 381 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 DCLRE1CQ96SD1 692 aaKnown RBP12.11□□□□□ -0.47
HOXC9-202ENST00000504557 COQ7Q99807 217 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 ATF6BQ99941 703 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 DGCR6LQ9BY27 220 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 MED20Q9H944 212 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 CYSLTR2Q9NS75 346 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 NKIRAS2Q9NYR9 191 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 POMPQ9Y244 141 aa12.11□□□□□ -0.47
HOXC9-202ENST00000504557 FAM183AA6NL82 134 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 RIIAD1A6NNX1 92 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 FAM157AC9JC47 383 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 H3BSA7 217 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 ICMTO60725 284 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 FKBP6O75344 327 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 LCATP04180 440 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 PSKH1P11801 424 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 PRKACGP22612 351 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 GGT2P36268 569 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 LIPAP38571 399 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 SLC6A9P48067 706 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 RGS6P49758 472 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 CDH15P55291 814 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 HIST1H3AP68431 136 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 MRPS11P82912 194 aaKnown RBP12.1□□□□□ -0.47
HOXC9-202ENST00000504557 FAM209AQ5JX71 171 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms