RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 ZNF28P17035 718 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 BDKRB2P30411 391 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 DLSTP36957 453 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 PRKXP51817 358 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 GPR85P60893 370 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 PPIAP62937 165 aaKnown RBP13.4□□□□□ -0.26
SNF8-203ENST00000504000 QRFPP83859 136 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 NAAAQ02083 359 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 PLCXD2Q0VAA5 305 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 TAF13Q15543 124 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 INPP5JQ15735 1006 aaPredicted RBP13.4□□□□□ -0.26
SNF8-203ENST00000504000 CORO6Q6QEF8 472 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 ATRAIDQ6UW56 229 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 OR2W3Q7Z3T1 314 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 C17orf82Q86X59 251 aaPredicted RBP13.4□□□□□ -0.26
SNF8-203ENST00000504000 C9orf40Q8IXQ3 194 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 INO80EQ8NBZ0 244 aaPredicted RBP13.4□□□□□ -0.26
SNF8-203ENST00000504000 OR4D6Q8NGJ1 314 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 MRPL38Q96DV4 380 aaKnown RBP13.4□□□□□ -0.26
SNF8-203ENST00000504000 CDC6Q99741 560 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 FAM117AQ9C073 453 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 CUTCQ9NTM9 273 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 FBXO4Q9UKT5 387 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 MKL2Q9ULH7 1088 aa13.4□□□□□ -0.26
SNF8-203ENST00000504000 FARSAQ9Y285 508 aaKnown RBP13.4□□□□□ -0.26
SNF8-203ENST00000504000 IGHV5-51A0A0C4DH38 117 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 TMEM269A0A1B0GVZ9 245 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 A0A1W2PPC4 97 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 F8VVB4 439 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 F8VWA3 439 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 SULT2B1O00204 365 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 FGF16O43320 207 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 CASRP41180 1078 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 DAP3P51398 398 aaKnown RBP13.39□□□□□ -0.27
SNF8-203ENST00000504000 TAS2R31P59538 309 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 IL13RA1P78552 427 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 HTRA3P83110 453 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 CYCSP99999 105 aaKnown RBP13.39□□□□□ -0.27
SNF8-203ENST00000504000 FLI1Q01543 452 aaPredicted RBP13.39□□□□□ -0.27
SNF8-203ENST00000504000 SPOCK1Q08629 439 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 PNLIPRP3Q17RR3 467 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 CDNFQ49AH0 187 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 CCDC157Q569K6 752 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 PDSS1Q5T2R2 415 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 C3orf33Q6P1S2 294 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 FJX1Q86VR8 437 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 PRR22Q8IZ63 422 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 SLC22A24Q8N4F4 322 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 PAQR4Q8N4S7 273 aaPredicted RBP13.39□□□□□ -0.27
SNF8-203ENST00000504000 ZNF441Q8N8Z8 693 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 RNF133Q8WVZ7 376 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 TMEM234Q8WY98 164 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 MRGPRFQ96AM1 343 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 GAL3ST4Q96RP7 486 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 ZNF471Q9BX82 626 aaPredicted RBP13.39□□□□□ -0.27
SNF8-203ENST00000504000 WWTR1Q9GZV5 400 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 CST11Q9H112 138 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 SOHLH2Q9NX45 425 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 PISDQ9UG56 409 aa13.39□□□□□ -0.27
SNF8-203ENST00000504000 PURGQ9UJV8 347 aaKnown RBP13.39□□□□□ -0.27
SNF8-203ENST00000504000 WIPF3A6NGB9 483 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 STK17BO94768 372 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 FCER2P06734 321 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 ICAM2P13598 275 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 NR0B1P51843 470 aaKnown RBP13.38□□□□□ -0.27
SNF8-203ENST00000504000 MC2RQ01718 297 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 PPP1R1AQ13522 171 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 PRAMEF17Q5VTA0 474 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 ZNF529Q6P280 563 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 POMZP3Q6PJE2 187 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 DCXRQ7Z4W1 244 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 MDGA2Q7Z553 956 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 TRAPPC6BQ86SZ2 158 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 CARFQ8N187 725 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 BPIFCQ8NFQ6 507 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 OR1N1Q8NGS0 311 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 ASB10Q8WXI3 467 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 TSLPQ969D9 159 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 FOXN4Q96NZ1 517 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 KCNK17Q96T54 332 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 NPAS1Q99742 590 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 NMES1Q9C002 83 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 NKX6-2Q9C056 277 aaPredicted RBP13.38□□□□□ -0.27
SNF8-203ENST00000504000 FANCFQ9NPI8 374 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 CEACAM18A8MTB9 384 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 EFSO43281 561 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 ATG12O94817 140 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 CHRM2P08172 466 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 ABCD3P28288 659 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 CX3CR1P49238 355 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 ATP1B3P54709 279 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 FAM74A1Q5RGS3 127 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 SLC29A4Q7RTT9 530 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 GKN2Q86XP6 184 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 OR4S1Q8NGB4 309 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 MFSD8Q8NHS3 518 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 ST8SIA1Q92185 356 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 ZDHHC12Q96GR4 267 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 CNTD2Q9H8S5 307 aa13.38□□□□□ -0.27
SNF8-203ENST00000504000 COPS7AQ9UBW8 275 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms