RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 LRP12Q9Y561 859 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 A0A087WXM4 84 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 IQCMA0A1B0GVH7 501 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 TMEM129A0AVI4 362 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 OR6C6A6NF89 314 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 METTL15A6NJ78 407 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 PTHP01270 115 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 ZNF14P17017 642 aaPredicted RBP17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 IDH3GP51553 393 aaPredicted RBP17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 GALK2Q01415 458 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 RSPO1Q2MKA7 263 aaPredicted RBP17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 KCTD20Q7Z5Y7 419 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 SPRYD4Q8WW59 207 aaPredicted RBP17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 NDRG3Q9UGV2 375 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 ZNF254O75437 659 aa17.73■□□□□ 0.43
CDC42SE2-206ENST00000503291 ABHD16AO95870 558 aa17.73■□□□□ 0.43
CDC42SE2-206ENST00000503291 THBDP07204 575 aa17.73■□□□□ 0.43
CDC42SE2-206ENST00000503291 CELA3BP08861 270 aa17.73■□□□□ 0.43
CDC42SE2-206ENST00000503291 STOMP27105 288 aa17.73■□□□□ 0.43
CDC42SE2-206ENST00000503291 ECH1Q13011 328 aa17.73■□□□□ 0.43
CDC42SE2-206ENST00000503291 SYS1Q8N2H4 156 aa17.73■□□□□ 0.43
CDC42SE2-206ENST00000503291 FAM169BQ8N8A8 192 aa17.73■□□□□ 0.43
CDC42SE2-206ENST00000503291 YIPF7Q8N8F6 280 aa17.73■□□□□ 0.43
CDC42SE2-206ENST00000503291 OR52N1Q8NH53 320 aa17.73■□□□□ 0.43
CDC42SE2-206ENST00000503291 GATAD2BQ8WXI9 593 aa17.73■□□□□ 0.43
CDC42SE2-206ENST00000503291 COQ7Q99807 217 aa17.73■□□□□ 0.43
CDC42SE2-206ENST00000503291 MND1Q9BWT6 205 aa17.73■□□□□ 0.43
CDC42SE2-206ENST00000503291 ACOT13Q9NPJ3 140 aa17.73■□□□□ 0.43
CDC42SE2-206ENST00000503291 CRNNQ9UBG3 495 aaPredicted RBP17.73■□□□□ 0.43
CDC42SE2-206ENST00000503291 FBXL3Q9UKT7 428 aa17.73■□□□□ 0.43
CDC42SE2-206ENST00000503291 DBHP09172 617 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 TACSTD2P09758 323 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 COX5BP10606 129 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 ATP6V1B1P15313 513 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 PAX7P23759 505 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 RIDAP52758 137 aaKnown RBP17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 TBCEQ15813 527 aaPredicted RBP17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 LIPNQ5VXI9 398 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 MYPOPQ86VE0 399 aaPredicted RBP17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 SVOPQ8N4V2 548 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 ZNF485Q8NCK3 441 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 LINC01560Q8TB33 94 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 MOV10Q9HCE1 1003 aaKnown RBP17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 ACOXLQ9NUZ1 547 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 NPAP1Q9NZP6 1156 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 LOC100509620A0A075B734 347 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 F5H5K5 113 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 IGLV1-44P01699 117 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 MT-ND5P03915 603 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 CCL2P13500 99 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 PCMT1P22061 227 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 HSD11B1P28845 292 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 ZNF83P51522 516 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 WNT4P56705 351 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 GRB2P62993 217 aaKnown RBP17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 SEZ6L2Q6UXD5 910 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 SSX8Q7RTT4 187 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 FAM220AQ7Z4H9 259 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 WFDC8Q8IUA0 241 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 EGFL6Q8IUX8 553 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 SSC4DQ8WTU2 575 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 PELI1Q96FA3 418 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 OR5M11Q96RB7 305 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 KCNJ15Q99712 375 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 ATPIF1Q9UII2 106 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 DOPEY1Q5JWR5 2465 aa17.72■□□□□ 0.43
CDC42SE2-206ENST00000503291 TUBAL3A6NHL2 446 aa17.71■□□□□ 0.43
CDC42SE2-206ENST00000503291 CRYGSP22914 178 aa17.71■□□□□ 0.43
CDC42SE2-206ENST00000503291 PRKXP51817 358 aa17.71■□□□□ 0.43
CDC42SE2-206ENST00000503291 MED22Q15528 200 aa17.71■□□□□ 0.43
CDC42SE2-206ENST00000503291 SLC30A7Q8NEW0 376 aa17.71■□□□□ 0.43
CDC42SE2-206ENST00000503291 POM121L2Q96KW2 1035 aa17.71■□□□□ 0.43
CDC42SE2-206ENST00000503291 LSM2Q9Y333 95 aaKnown RBP17.71■□□□□ 0.43
CDC42SE2-206ENST00000503291 C5orf49A4QMS7 147 aa17.71■□□□□ 0.42
CDC42SE2-206ENST00000503291 RPP14O95059 124 aaKnown RBP17.71■□□□□ 0.42
CDC42SE2-206ENST00000503291 SMIM18P0DKX4 95 aa17.71■□□□□ 0.42
CDC42SE2-206ENST00000503291 CCNOP22674 350 aa17.71■□□□□ 0.42
CDC42SE2-206ENST00000503291 OTX1P32242 354 aaPredicted RBP17.71■□□□□ 0.42
CDC42SE2-206ENST00000503291 APLNRP35414 380 aa17.71■□□□□ 0.42
CDC42SE2-206ENST00000503291 DOC2BQ14184 412 aa17.71■□□□□ 0.42
CDC42SE2-206ENST00000503291 SPHARQ15513 63 aa17.71■□□□□ 0.42
CDC42SE2-206ENST00000503291 KCTD8Q6ZWB6 473 aa17.71■□□□□ 0.42
CDC42SE2-206ENST00000503291 SPTSSAQ969W0 71 aa17.71■□□□□ 0.42
CDC42SE2-206ENST00000503291 NIPAL2Q9H841 368 aa17.71■□□□□ 0.42
CDC42SE2-206ENST00000503291 BABAM2Q9NXR7 383 aa17.71■□□□□ 0.42
CDC42SE2-206ENST00000503291 IGHV1-18A0A0C4DH31 117 aa17.7■□□□□ 0.42
CDC42SE2-206ENST00000503291 M0R1B8 84 aa17.7■□□□□ 0.42
CDC42SE2-206ENST00000503291 LCKP06239 509 aa17.7■□□□□ 0.42
CDC42SE2-206ENST00000503291 CECR9P0C854 216 aa17.7■□□□□ 0.42
CDC42SE2-206ENST00000503291 DCTDP32321 178 aa17.7■□□□□ 0.42
CDC42SE2-206ENST00000503291 GDI2P50395 445 aaKnown RBP17.7■□□□□ 0.42
CDC42SE2-206ENST00000503291 KRTAP27-1Q3LI81 207 aa17.7■□□□□ 0.42
CDC42SE2-206ENST00000503291 NAA40Q86UY6 237 aa17.7■□□□□ 0.42
CDC42SE2-206ENST00000503291 KLBQ86Z14 1044 aa17.7■□□□□ 0.42
CDC42SE2-206ENST00000503291 TRIM64CA6NLI5 447 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 E9PI62 339 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 C19orf84I3L1E1 186 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 PSMB10P40306 273 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 XAF1Q6GPH4 301 aa17.69■□□□□ 0.42
CDC42SE2-206ENST00000503291 RORBQ92753 470 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms