RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 M0QX08 132 aa12.88□□□□□ -0.35
HDAC6-236ENST00000498808 NPY4RP50391 375 aa12.88□□□□□ -0.35
HDAC6-236ENST00000498808 METTL11BQ5VVY1 283 aa12.88□□□□□ -0.35
HDAC6-236ENST00000498808 C11orf87Q6NUJ2 197 aa12.88□□□□□ -0.35
HDAC6-236ENST00000498808 Q6ZTK2 550 aa12.88□□□□□ -0.35
HDAC6-236ENST00000498808 NKAIN4Q8IVV8 208 aa12.88□□□□□ -0.35
HDAC6-236ENST00000498808 SLC30A8Q8IWU4 369 aa12.88□□□□□ -0.35
HDAC6-236ENST00000498808 PDZD9Q8IXQ8 264 aa12.88□□□□□ -0.35
HDAC6-236ENST00000498808 LIPHQ8WWY8 451 aa12.88□□□□□ -0.35
HDAC6-236ENST00000498808 SGTBQ96EQ0 304 aa12.88□□□□□ -0.35
HDAC6-236ENST00000498808 COG8Q96MW5 612 aa12.88□□□□□ -0.35
HDAC6-236ENST00000498808 RBP7Q96R05 134 aa12.88□□□□□ -0.35
HDAC6-236ENST00000498808 SEMA6AQ9H2E6 1030 aa12.88□□□□□ -0.35
HDAC6-236ENST00000498808 TOR3AQ9H497 397 aa12.88□□□□□ -0.35
HDAC6-236ENST00000498808 SMURF1Q9HCE7 757 aa12.88□□□□□ -0.35
HDAC6-236ENST00000498808 POLE4Q9NR33 117 aa12.88□□□□□ -0.35
HDAC6-236ENST00000498808 PTTG3PQ9NZH4 202 aa12.88□□□□□ -0.35
HDAC6-236ENST00000498808 SGCEO43556 437 aa12.87□□□□□ -0.35
HDAC6-236ENST00000498808 SNNO75324 88 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-236ENST00000498808 CD247P20963 164 aa12.87□□□□□ -0.35
HDAC6-236ENST00000498808 CD276Q5ZPR3 534 aa12.87□□□□□ -0.35
HDAC6-236ENST00000498808 SLC35E4Q6ICL7 350 aa12.87□□□□□ -0.35
HDAC6-236ENST00000498808 FBXW12Q6X9E4 464 aa12.87□□□□□ -0.35
HDAC6-236ENST00000498808 FUNDC1Q8IVP5 155 aa12.87□□□□□ -0.35
HDAC6-236ENST00000498808 C11orf44Q8N8P7 122 aa12.87□□□□□ -0.35
HDAC6-236ENST00000498808 TMEM255BQ8WV15 326 aa12.87□□□□□ -0.35
HDAC6-236ENST00000498808 TMEM109Q9BVC6 243 aa12.87□□□□□ -0.35
HDAC6-236ENST00000498808 THAP1Q9NVV9 213 aa12.87□□□□□ -0.35
HDAC6-236ENST00000498808 ZNRD1Q9P1U0 126 aa12.87□□□□□ -0.35
HDAC6-236ENST00000498808 TENM3Q9P273 2699 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 DNAH9Q9NYC9 4486 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 A0A1B0GWJ7 208 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 FCN3O75636 299 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 TGFBR2P37173 567 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 GUCA1AP43080 201 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-236ENST00000498808 GATA4P43694 442 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 RPL27P61353 136 aaKnown RBP12.86□□□□□ -0.35
HDAC6-236ENST00000498808 ARF6P62330 175 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 SCRN3Q0VDG4 424 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 MAB21L1Q13394 359 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 ALG10Q5BKT4 473 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 CLEC12AQ5QGZ9 265 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 GALNT4Q8N4A0 578 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 PNLDC1Q8NA58 520 aaKnown RBP12.86□□□□□ -0.35
HDAC6-236ENST00000498808 BHLHE23Q8NDY6 225 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 FNDC8Q8TC99 324 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 Q8TCH9 128 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 SGCDQ92629 289 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 ZNF582Q96NG8 517 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-236ENST00000498808 PAIP2Q9BPZ3 127 aaKnown RBP12.86□□□□□ -0.35
HDAC6-236ENST00000498808 CPPED1Q9BRF8 314 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-236ENST00000498808 RASSF4Q9H2L5 321 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 MMADHCQ9H3L0 296 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-236ENST00000498808 ERVK-18Q9QC07 812 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 FBLN5Q9UBX5 448 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 FOXJ3Q9UPW0 622 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 SIGLEC9Q9Y336 463 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 USH1CQ9Y6N9 552 aa12.86□□□□□ -0.35
HDAC6-236ENST00000498808 COL7A1Q02388 2944 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 IQCF6A8MYZ5 107 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 FAM20BO75063 409 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 IGF2P01344 180 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 HLA-DPB1P04440 258 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 DBHP09172 617 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 IRF2P14316 349 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 RBM34P42696 430 aaKnown RBP12.85□□□□□ -0.35
HDAC6-236ENST00000498808 KRT71Q3SY84 523 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 BLOC1S3Q6QNY0 202 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 IGFN1Q86VF2 1251 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 PCYOX1LQ8NBM8 494 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 C11orf65Q8NCR3 313 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 CFHR4Q92496 578 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 PHF21AQ96BD5 680 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 ITPKCQ96DU7 683 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 WACQ9BTA9 647 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 CORO2BQ9UQ03 480 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 HIF3AQ9Y2N7 669 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 FAM96BQ9Y3D0 163 aa12.85□□□□□ -0.35
HDAC6-236ENST00000498808 BTBD17A6NE02 478 aa12.84□□□□□ -0.35
HDAC6-236ENST00000498808 OR6C6A6NF89 314 aa12.84□□□□□ -0.35
HDAC6-236ENST00000498808 EVPLLA8MZ36 301 aa12.84□□□□□ -0.35
HDAC6-236ENST00000498808 H7C1C5 153 aa12.84□□□□□ -0.35
HDAC6-236ENST00000498808 J3QW42 95 aa12.84□□□□□ -0.35
HDAC6-236ENST00000498808 RGS16O15492 202 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-236ENST00000498808 FBP1P09467 338 aa12.84□□□□□ -0.35
HDAC6-236ENST00000498808 GABRA5P31644 462 aa12.84□□□□□ -0.35
HDAC6-236ENST00000498808 MRPL19P49406 292 aaKnown RBP12.84□□□□□ -0.35
HDAC6-236ENST00000498808 EFNB2P52799 333 aa12.84□□□□□ -0.35
HDAC6-236ENST00000498808 RAD23AP54725 363 aa12.84□□□□□ -0.35
HDAC6-236ENST00000498808 LCN6P62502 163 aa12.84□□□□□ -0.35
HDAC6-236ENST00000498808 PRAMEF6Q5VXH4 476 aa12.84□□□□□ -0.35
HDAC6-236ENST00000498808 OTPQ5XKR4 325 aa12.84□□□□□ -0.35
HDAC6-236ENST00000498808 SFRP4Q6FHJ7 346 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-236ENST00000498808 TMEM239Q8WW34 195 aa12.84□□□□□ -0.35
HDAC6-236ENST00000498808 TAMM41Q96BW9 452 aa12.84□□□□□ -0.35
HDAC6-236ENST00000498808 RASD2Q96D21 266 aa12.84□□□□□ -0.35
HDAC6-236ENST00000498808 SPDL1Q96EA4 605 aa12.84□□□□□ -0.35
HDAC6-236ENST00000498808 KCNK9Q9NPC2 374 aa12.84□□□□□ -0.35
HDAC6-236ENST00000498808 UFSP2Q9NUQ7 469 aa12.84□□□□□ -0.35
HDAC6-236ENST00000498808 FBP2O00757 339 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms