RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 RGRP47804 291 aa5.38□□□□□ -1.55
USF3-204ENST00000496826 NRG1Q02297 640 aaPredicted RBP5.38□□□□□ -1.55
USF3-204ENST00000496826 RELQ04864 619 aaPredicted RBP5.38□□□□□ -1.55
USF3-204ENST00000496826 TMEM241Q24JQ0 296 aa5.38□□□□□ -1.55
USF3-204ENST00000496826 ZNF260Q3ZCT1 412 aa5.38□□□□□ -1.55
USF3-204ENST00000496826 C1QTNF12Q5T7M4 302 aa5.38□□□□□ -1.55
USF3-204ENST00000496826 SLC35E4Q6ICL7 350 aa5.38□□□□□ -1.55
USF3-204ENST00000496826 LDB1Q86U70 411 aaPredicted RBP5.38□□□□□ -1.55
USF3-204ENST00000496826 GALNT16Q8N428 558 aa5.38□□□□□ -1.55
USF3-204ENST00000496826 NAA50Q9GZZ1 169 aaKnown RBP5.38□□□□□ -1.55
USF3-204ENST00000496826 OSGIN1Q9UJX0 560 aa5.38□□□□□ -1.55
USF3-204ENST00000496826 CASZ1Q86V15 1759 aa5.38□□□□□ -1.55
USF3-204ENST00000496826 USP6P35125 1406 aa5.38□□□□□ -1.55
USF3-204ENST00000496826 hCG_1818297A0A087WSY0 165 aa5.38□□□□□ -1.55
USF3-204ENST00000496826 A8MT66 165 aa5.38□□□□□ -1.55
USF3-204ENST00000496826 HRO43593 1189 aa5.38□□□□□ -1.55
USF3-204ENST00000496826 NME2P1O60361 137 aa5.38□□□□□ -1.55
USF3-204ENST00000496826 ICAM1P05362 532 aa5.38□□□□□ -1.55
USF3-204ENST00000496826 OR1E2P47887 323 aa5.38□□□□□ -1.55
USF3-204ENST00000496826 CDC34P49427 236 aaPredicted RBP5.38□□□□□ -1.55
USF3-204ENST00000496826 COMPP49747 757 aaPredicted RBP5.38□□□□□ -1.55
USF3-204ENST00000496826 YOD1Q5VVQ6 348 aaPredicted RBP5.38□□□□□ -1.55
USF3-204ENST00000496826 OAZ3Q9UMX2 235 aa5.38□□□□□ -1.55
USF3-204ENST00000496826 COX11Q9Y6N1 276 aa5.38□□□□□ -1.55
USF3-204ENST00000496826 TRBC2A0A5B9 178 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 PGPA6NDG6 321 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 NUDT21O43809 227 aaKnown RBP5.37□□□□□ -1.55
USF3-204ENST00000496826 AVPR2P30518 371 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 MEIG1Q5JSS6 88 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 FNDC7Q5VTL7 733 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 ZNF793Q6ZN11 406 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 OR2C3Q8N628 320 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 OR10J6PQ8NGY7 276 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 OR51A7Q8NH64 312 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 TMEM239Q8WW34 195 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 TMEM158Q8WZ71 300 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 PORCNQ9H237 461 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 MAGIXQ9H6Y5 334 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 A4GNTQ9UNA3 340 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 OR51B4Q9Y5P0 310 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 CRB1P82279 1406 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 SPTBP11277 2137 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 LNP1A1A4G5 178 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 LINC01387J3KSC0 135 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 ZNF749O43361 778 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 EFNB2P52799 333 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 GNB1P62873 340 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 TSTQ16762 297 aaKnown RBP5.37□□□□□ -1.55
USF3-204ENST00000496826 KLHDC7AQ5VTJ3 777 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 CCDC144NLQ6NUI1 221 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 SLCO4C1Q6ZQN7 724 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 NRMQ8IXM6 262 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 TMEM251Q8N6I4 163 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 C5orf17Q8NAS9 161 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 NEUROG1Q92886 237 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 C6orf106Q9H6K1 298 aaPredicted RBP5.37□□□□□ -1.55
USF3-204ENST00000496826 TMEM167BQ9NRX6 74 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 SIRPGQ9P1W8 387 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 A0A1B0GVT2 93 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 TYROBPO43914 113 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 F13BP05160 661 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 FECHP22830 423 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 CNTFRP26992 372 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 ZNF691Q5VV52 312 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 MBLAC2Q68D91 279 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 DHRS4L2Q6PKH6 230 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 Q8N9G6 341 aaPredicted RBP5.37□□□□□ -1.55
USF3-204ENST00000496826 FAM210BQ96KR6 192 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 MKRN2Q9H000 416 aaKnown RBP5.37□□□□□ -1.55
USF3-204ENST00000496826 OLAHQ9NV23 265 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 OR1A2Q9Y585 309 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 LOC100130705A0A1B0GUX0 176 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 VWC2LB2RUY7 222 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 M0QYG6 137 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 MPIG6BO95866 241 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 TFAP2AP05549 437 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 CHRM2P08172 466 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 VEGFAP15692 232 aaPredicted RBP5.37□□□□□ -1.55
USF3-204ENST00000496826 FAM74A3Q4VXF1 159 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 TEX44Q53QW1 395 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 SLC7A5P1Q8MH63 180 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 OR2Z1Q8NG97 314 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 OIT3Q8WWZ8 545 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 RPEQ96AT9 228 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 OR2D2Q9H210 308 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 IL37Q9NZH6 218 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 SLAMF8Q9P0V8 285 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 ZNF629Q9UEG4 869 aaPredicted RBP5.37□□□□□ -1.55
USF3-204ENST00000496826 DENND4BO75064 1496 aaPredicted RBP5.37□□□□□ -1.55
USF3-204ENST00000496826 MAPKBP1O60336 1514 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 A0A0B4J2A0 478 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 DSCR3O14972 297 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 CFDP00746 253 aaPredicted RBP5.37□□□□□ -1.55
USF3-204ENST00000496826 INHBBP09529 407 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 VSIG10L2P0DP72 767 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 DRD1P21728 446 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 ZNF763Q0D2J5 394 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 GANABQ14697 944 aaKnown RBP5.37□□□□□ -1.55
USF3-204ENST00000496826 BCL7AQ4VC05 210 aa5.37□□□□□ -1.55
USF3-204ENST00000496826 ARRDC1Q8N5I2 433 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms