RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 SMIM4Q8WVI0 70 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 FCAMRQ8WWV6 532 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 C11orf40Q8WZ69 217 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 CPNE2Q96FN4 548 aaPredicted RBP6.16□□□□□ -1.42
USP39-219ENST00000496047 MAP6Q96JE9 813 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 FOXN4Q96NZ1 517 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 SORCS2Q96PQ0 1159 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 SOSTQ9BQB4 213 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 NEURL2Q9BR09 285 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 MESP1Q9BRJ9 268 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 EMC6Q9BV81 110 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 ULBP2Q9BZM5 246 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 ACTR6Q9GZN1 396 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 ABCG5Q9H222 651 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 NELFAQ9H3P2 528 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 PLEKHA1Q9HB21 404 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 SH2D2AQ9NP31 389 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 DDX28Q9NUL7 540 aaKnown RBP6.16□□□□□ -1.42
USP39-219ENST00000496047 STMN3Q9NZ72 180 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 GLTPQ9NZD2 209 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 LRFN1Q9P244 771 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 PAIP2BQ9ULR5 123 aaKnown RBP6.16□□□□□ -1.42
USP39-219ENST00000496047 CLEC4AQ9UMR7 237 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 RCE1Q9Y256 329 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 MRPS7Q9Y2R9 242 aaKnown RBP6.16□□□□□ -1.42
USP39-219ENST00000496047 KLF13Q9Y2Y9 288 aaPredicted RBP6.16□□□□□ -1.42
USP39-219ENST00000496047 EMC9Q9Y3B6 208 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 NUBP2Q9Y5Y2 271 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 CEP250Q9BV73 2442 aa6.16□□□□□ -1.42
USP39-219ENST00000496047 A0A0A6YYH2 397 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 LOC100289279A0A1B0GTE1 492 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 TMEM238LA0A1B0GVL6 79 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 MEIOCA2RUB1 952 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 METTL21EPA6NDL7 271 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 HMX3A6NHT5 357 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 A6NJ64 397 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 OR6C65A6NJZ3 312 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 PRR32B1ATL7 298 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 C9orf172C9J069 976 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 J3QW42 95 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 SLC17A2O00624 439 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 CDX4O14627 284 aaPredicted RBP6.15□□□□□ -1.42
USP39-219ENST00000496047 DVL2O14641 736 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 TNFSF11O14788 317 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 SYT7O43581 403 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 TNFSF15O95150 251 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 SYNGR4O95473 234 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 GPANK1O95872 356 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 PAHP00439 452 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 ITGB2P05107 769 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 ADRB1P08588 477 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 QDPRP09417 244 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 CSF1P09603 554 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 SPNP16150 400 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 CFPP27918 469 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 HLA-DMAP28067 261 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 MNDAP41218 407 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 RPS27P42677 84 aaKnown RBP6.15□□□□□ -1.42
USP39-219ENST00000496047 ACTBP60709 375 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 BTG1P62324 171 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 ACTG1P63261 375 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 SSBP1Q04837 148 aaKnown RBP6.15□□□□□ -1.42
USP39-219ENST00000496047 TRIP6Q15654 476 aaKnown RBP6.15□□□□□ -1.42
USP39-219ENST00000496047 ETFDHQ16134 617 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 CSRP2Q16527 193 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 KCNMB1Q16558 191 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 C10orf128Q5T292 105 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 DHRS13Q6UX07 377 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 ASB18Q6ZVZ8 466 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 PGAP1Q75T13 922 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 FCRLAQ7L513 359 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 CHMP1BQ7LBR1 199 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 TIPARPQ7Z3E1 657 aaKnown RBP6.15□□□□□ -1.42
USP39-219ENST00000496047 ADGRE4PQ86SQ3 457 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 NR2C2APQ86WQ0 139 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 SERPINA12Q8IW75 414 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 BEST3Q8N1M1 668 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 GPR137CQ8N3F9 429 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 PRSS35Q8N3Z0 413 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 JAGN1Q8N5M9 183 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 CELF2-AS1Q8N7Q2 184 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 PNLDC1Q8NA58 520 aaKnown RBP6.15□□□□□ -1.42
USP39-219ENST00000496047 DUSP18Q8NEJ0 188 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 GJC3Q8NFK1 279 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 OR9K2Q8NGE7 335 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 OR5D14Q8NGL3 314 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 ST7LQ8TDW4 575 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 HSD17B8Q92506 261 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 RGP1Q92546 391 aaPredicted RBP6.15□□□□□ -1.42
USP39-219ENST00000496047 MCHR2Q969V1 340 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 RELTQ969Z4 430 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 DACT3Q96B18 629 aaPredicted RBP6.15□□□□□ -1.42
USP39-219ENST00000496047 HAVCR1Q96D42 359 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 ZFP3Q96NJ6 502 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 GNRHR2Q96P88 292 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 MRPL13Q9BYD1 178 aaKnown RBP6.15□□□□□ -1.42
USP39-219ENST00000496047 OR2B2Q9GZK3 357 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 PPIL3Q9H2H8 161 aaKnown RBP6.15□□□□□ -1.42
USP39-219ENST00000496047 ZFP64Q9NPA5 681 aa6.15□□□□□ -1.42
USP39-219ENST00000496047 ING3Q9NXR8 418 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms