RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 LOC100509620A0A075B734 347 aa16.91■□□□□ 0.3
ATG3-208ENST00000495756 M0R1B8 84 aa16.91■□□□□ 0.3
ATG3-208ENST00000495756 MAGEB4O15481 346 aaPredicted RBP16.91■□□□□ 0.3
ATG3-208ENST00000495756 TNFAIP8O95379 198 aa16.91■□□□□ 0.3
ATG3-208ENST00000495756 HTR1AP08908 422 aa16.91■□□□□ 0.3
ATG3-208ENST00000495756 H2BFMP0C1H6 154 aa16.91■□□□□ 0.3
ATG3-208ENST00000495756 CECR9P0C854 216 aa16.91■□□□□ 0.3
ATG3-208ENST00000495756 TAF13Q15543 124 aa16.91■□□□□ 0.3
ATG3-208ENST00000495756 RSPO1Q2MKA7 263 aaPredicted RBP16.91■□□□□ 0.3
ATG3-208ENST00000495756 CDONQ4KMG0 1287 aa16.91■□□□□ 0.3
ATG3-208ENST00000495756 ZNF679Q8IYX0 411 aa16.91■□□□□ 0.3
ATG3-208ENST00000495756 ACBD4Q8NC06 268 aa16.91■□□□□ 0.3
ATG3-208ENST00000495756 SLC30A7Q8NEW0 376 aa16.91■□□□□ 0.3
ATG3-208ENST00000495756 SNX33Q8WV41 574 aa16.91■□□□□ 0.3
ATG3-208ENST00000495756 SLC7A6Q92536 515 aa16.91■□□□□ 0.3
ATG3-208ENST00000495756 NR1H4Q96RI1 486 aaPredicted RBP16.91■□□□□ 0.3
ATG3-208ENST00000495756 CDCA4Q9BXL8 241 aa16.91■□□□□ 0.3
ATG3-208ENST00000495756 CHCHD3Q9NX63 227 aaKnown RBP16.91■□□□□ 0.3
ATG3-208ENST00000495756 CRIM1Q9NZV1 1036 aa16.91■□□□□ 0.3
ATG3-208ENST00000495756 CLEC2DQ9UHP7 191 aa16.91■□□□□ 0.3
ATG3-208ENST00000495756 MRM2Q9UI43 246 aaKnown RBP16.91■□□□□ 0.3
ATG3-208ENST00000495756 IKZF2Q9UKS7 526 aa16.91■□□□□ 0.3
ATG3-208ENST00000495756 TRIM64A6NGJ6 449 aa16.9■□□□□ 0.3
ATG3-208ENST00000495756 ZNF254O75437 659 aa16.9■□□□□ 0.3
ATG3-208ENST00000495756 CLDN1O95832 211 aa16.9■□□□□ 0.3
ATG3-208ENST00000495756 KRT8P05787 483 aa16.9■□□□□ 0.3
ATG3-208ENST00000495756 CRYGSP22914 178 aa16.9■□□□□ 0.3
ATG3-208ENST00000495756 APLNRP35414 380 aa16.9■□□□□ 0.3
ATG3-208ENST00000495756 GDI2P50395 445 aaKnown RBP16.9■□□□□ 0.3
ATG3-208ENST00000495756 ACTA2P62736 377 aa16.9■□□□□ 0.3
ATG3-208ENST00000495756 GRB2P62993 217 aaKnown RBP16.9■□□□□ 0.3
ATG3-208ENST00000495756 ACTG2P63267 376 aa16.9■□□□□ 0.3
ATG3-208ENST00000495756 KRTAP27-1Q3LI81 207 aa16.9■□□□□ 0.3
ATG3-208ENST00000495756 RNLSQ5VYX0 342 aa16.9■□□□□ 0.3
ATG3-208ENST00000495756 PLEKHG7Q6ZR37 379 aa16.9■□□□□ 0.3
ATG3-208ENST00000495756 PRSS48Q7RTY5 328 aa16.9■□□□□ 0.3
ATG3-208ENST00000495756 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.9■□□□□ 0.3
ATG3-208ENST00000495756 SPTSSAQ969W0 71 aa16.9■□□□□ 0.3
ATG3-208ENST00000495756 MRPL48Q96GC5 212 aaKnown RBP16.9■□□□□ 0.3
ATG3-208ENST00000495756 POM121L2Q96KW2 1035 aa16.9■□□□□ 0.3
ATG3-208ENST00000495756 MYCBPQ99417 103 aaPredicted RBP16.9■□□□□ 0.3
ATG3-208ENST00000495756 ELOVL3Q9HB03 270 aa16.9■□□□□ 0.3
ATG3-208ENST00000495756 LRP12Q9Y561 859 aa16.9■□□□□ 0.3
ATG3-208ENST00000495756 A1L4Q6 167 aa16.89■□□□□ 0.29
ATG3-208ENST00000495756 METTL15A6NJ78 407 aa16.89■□□□□ 0.29
ATG3-208ENST00000495756 SULT1C4O75897 302 aa16.89■□□□□ 0.29
ATG3-208ENST00000495756 MT-ND2P03891 347 aa16.89■□□□□ 0.29
ATG3-208ENST00000495756 DBHP09172 617 aa16.89■□□□□ 0.29
ATG3-208ENST00000495756 EPXP11678 715 aa16.89■□□□□ 0.29
ATG3-208ENST00000495756 CCL2P13500 99 aa16.89■□□□□ 0.29
ATG3-208ENST00000495756 GALK2Q01415 458 aa16.89■□□□□ 0.29
ATG3-208ENST00000495756 TBC1D28Q2M2D7 210 aa16.89■□□□□ 0.29
ATG3-208ENST00000495756 TP53I3Q53FA7 332 aa16.89■□□□□ 0.29
ATG3-208ENST00000495756 TMEM108Q6UXF1 575 aa16.89■□□□□ 0.29
ATG3-208ENST00000495756 MEX3BQ6ZN04 569 aaKnown RBP16.89■□□□□ 0.29
ATG3-208ENST00000495756 FAM222BQ8WU58 562 aa16.89■□□□□ 0.29
ATG3-208ENST00000495756 KCNJ15Q99712 375 aa16.89■□□□□ 0.29
ATG3-208ENST00000495756 CCDC90BQ9GZT6 254 aa16.89■□□□□ 0.29
ATG3-208ENST00000495756 BAHCC1Q9P281 2608 aa16.89■□□□□ 0.29
ATG3-208ENST00000495756 C5orf49A4QMS7 147 aa16.88■□□□□ 0.29
ATG3-208ENST00000495756 F5H5K5 113 aa16.88■□□□□ 0.29
ATG3-208ENST00000495756 CASKO14936 926 aa16.88■□□□□ 0.29
ATG3-208ENST00000495756 MRPS14O60783 128 aaKnown RBP16.88■□□□□ 0.29
ATG3-208ENST00000495756 ABHD16AO95870 558 aa16.88■□□□□ 0.29
ATG3-208ENST00000495756 CD40P25942 277 aa16.88■□□□□ 0.29
ATG3-208ENST00000495756 HSD11B1P28845 292 aa16.88■□□□□ 0.29
ATG3-208ENST00000495756 OTX1P32242 354 aaPredicted RBP16.88■□□□□ 0.29
ATG3-208ENST00000495756 CDH15P55291 814 aa16.88■□□□□ 0.29
ATG3-208ENST00000495756 OR12D2P58182 307 aa16.88■□□□□ 0.29
ATG3-208ENST00000495756 IRF3Q14653 427 aa16.88■□□□□ 0.29
ATG3-208ENST00000495756 KCTD20Q7Z5Y7 419 aa16.88■□□□□ 0.29
ATG3-208ENST00000495756 SYS1Q8N2H4 156 aa16.88■□□□□ 0.29
ATG3-208ENST00000495756 PAQR4Q8N4S7 273 aaPredicted RBP16.88■□□□□ 0.29
ATG3-208ENST00000495756 IL17RDQ8NFM7 739 aa16.88■□□□□ 0.29
ATG3-208ENST00000495756 OR1J2Q8NGS2 313 aa16.88■□□□□ 0.29
ATG3-208ENST00000495756 ZNF696Q9H7X3 374 aa16.88■□□□□ 0.29
ATG3-208ENST00000495756 ISG20L2Q9H9L3 353 aaKnown RBP16.88■□□□□ 0.29
ATG3-208ENST00000495756 GNG8Q9UK08 70 aa16.88■□□□□ 0.29
ATG3-208ENST00000495756 ERGIC3Q9Y282 383 aa16.88■□□□□ 0.29
ATG3-208ENST00000495756 CAB39Q9Y376 341 aaPredicted RBP16.88■□□□□ 0.29
ATG3-208ENST00000495756 CADP27708 2225 aa16.88■□□□□ 0.29
ATG3-208ENST00000495756 TMEM129A0AVI4 362 aa16.87■□□□□ 0.29
ATG3-208ENST00000495756 DPRXA6NFQ7 191 aa16.87■□□□□ 0.29
ATG3-208ENST00000495756 J3QLW9 94 aa16.87■□□□□ 0.29
ATG3-208ENST00000495756 ZNF19P17023 458 aa16.87■□□□□ 0.29
ATG3-208ENST00000495756 CCNOP22674 350 aa16.87■□□□□ 0.29
ATG3-208ENST00000495756 PTAFRP25105 342 aa16.87■□□□□ 0.29
ATG3-208ENST00000495756 PRKXP51817 358 aa16.87■□□□□ 0.29
ATG3-208ENST00000495756 RIDAP52758 137 aaKnown RBP16.87■□□□□ 0.29
ATG3-208ENST00000495756 NAAAQ02083 359 aa16.87■□□□□ 0.29
ATG3-208ENST00000495756 OR2G6Q5TZ20 316 aa16.87■□□□□ 0.29
ATG3-208ENST00000495756 TMPRSS11AQ6ZMR5 421 aa16.87■□□□□ 0.29
ATG3-208ENST00000495756 FAM220AQ7Z4H9 259 aa16.87■□□□□ 0.29
ATG3-208ENST00000495756 EGFL6Q8IUX8 553 aa16.87■□□□□ 0.29
ATG3-208ENST00000495756 KLHL36Q8N4N3 616 aa16.87■□□□□ 0.29
ATG3-208ENST00000495756 YIPF7Q8N8F6 280 aa16.87■□□□□ 0.29
ATG3-208ENST00000495756 C4orf36Q96KX1 117 aa16.87■□□□□ 0.29
ATG3-208ENST00000495756 SPOCK3Q9BQ16 436 aa16.87■□□□□ 0.29
ATG3-208ENST00000495756 ESRP2Q9H6T0 727 aaKnown RBP16.87■□□□□ 0.29
ATG3-208ENST00000495756 NIPAL2Q9H841 368 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms