RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 SSBP1Q04837 148 aaKnown RBP11.63□□□□□ -0.55
PTPN7-217ENST00000495688 OR7A5Q15622 319 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 CDNFQ49AH0 187 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 RHOUQ7L0Q8 258 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 PAQR4Q8N4S7 273 aaPredicted RBP11.63□□□□□ -0.55
PTPN7-217ENST00000495688 OR5M8Q8NGP6 311 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 OR1N1Q8NGS0 311 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 MRPS24Q96EL2 167 aaKnown RBP11.63□□□□□ -0.55
PTPN7-217ENST00000495688 PDCD10Q9BUL8 212 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.63□□□□□ -0.55
PTPN7-217ENST00000495688 FOXQ1Q9C009 403 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 VN1R1Q9GZP7 353 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 CST11Q9H112 138 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 COPS7AQ9UBW8 275 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 CTSFQ9UBX1 484 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 GDF2Q9UK05 429 aaPredicted RBP11.63□□□□□ -0.55
PTPN7-217ENST00000495688 VDAC3Q9Y277 283 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 RHBDD3Q9Y3P4 386 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 OR14I1A6ND48 311 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 RAB27BO00194 218 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 SULT1C2O00338 296 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 ZNF823P16415 610 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 CD34P28906 385 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 CRABP1P29762 137 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 LUMP51884 338 aaPredicted RBP11.63□□□□□ -0.55
PTPN7-217ENST00000495688 CAPZA1P52907 286 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 ATP1B3P54709 279 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 CFHR1Q03591 330 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 UNC119Q13432 240 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 ELP2Q6IA86 826 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 SLC29A4Q7RTT9 530 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 FJX1Q86VR8 437 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 GKN2Q86XP6 184 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 LYPD6Q86Y78 171 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 ZNF584Q8IVC4 421 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 CHST4Q8NCG5 386 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 OR52N4Q8NGI2 321 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 OR10K1Q8NGX5 313 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 DAZLQ92904 295 aaKnown RBP11.63□□□□□ -0.55
PTPN7-217ENST00000495688 MICU1Q9BPX6 476 aa11.63□□□□□ -0.55
PTPN7-217ENST00000495688 A0A1B0GTI1 187 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 FAM25EA8MYX2 175 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 BET1O15155 118 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 SNAPC5O75971 98 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 CD74P04233 296 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 AVPR2P30518 371 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 GNALP38405 381 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 POU3F1Q03052 451 aaPredicted RBP11.62□□□□□ -0.55
PTPN7-217ENST00000495688 PPP1R1AQ13522 171 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 ZNF273Q14593 569 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 JMJD6Q6NYC1 403 aaPredicted RBP11.62□□□□□ -0.55
PTPN7-217ENST00000495688 TFAP2EQ6VUC0 442 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 HSD17B13Q7Z5P4 300 aaPredicted RBP11.62□□□□□ -0.55
PTPN7-217ENST00000495688 PPP1R1CQ8WVI7 109 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 ZBTB8AQ96BR9 441 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 SPACA5Q96QH8 159 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 NUDT22Q9BRQ3 303 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 EDEM2Q9BV94 578 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 SCPEP1Q9HB40 452 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 ZNF304Q9HCX3 659 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 HRH3Q9Y5N1 445 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 CD8AP01732 235 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 OPN1LWP04000 364 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 CD37P11049 281 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 FBLP22087 321 aaKnown RBP11.62□□□□□ -0.55
PTPN7-217ENST00000495688 CD38P28907 300 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 ARL4DP49703 201 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 PNLIPRP2P54317 469 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 FBXW4P57775 412 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 DCAF7P61962 342 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 TOMM20Q15388 145 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 CLVS2Q5SYC1 327 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 TRAPPC6BQ86SZ2 158 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 PXT1Q8NFP0 134 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 OR52H1Q8NGJ2 320 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 ADAT3Q96EY9 351 aaPredicted RBP11.62□□□□□ -0.55
PTPN7-217ENST00000495688 ZDHHC12Q96GR4 267 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 SUSD2Q9UGT4 822 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 SLC5A6Q9Y289 635 aa11.62□□□□□ -0.55
PTPN7-217ENST00000495688 IGHV1OR15-9A0A0B4J2B8 117 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 RNF222A6NCQ9 220 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 RHPN2P1A8MT19 583 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 ATP6V1G2-DDX39BF2Z307 99 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 H3BML4 177 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 TO15178 435 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 DCNP07585 359 aaKnown RBP11.61□□□□□ -0.55
PTPN7-217ENST00000495688 MGMTP16455 207 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 GNB3P16520 340 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 ZNF260Q3ZCT1 412 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 RNASE10Q5GAN6 216 aaKnown RBP11.61□□□□□ -0.55
PTPN7-217ENST00000495688 DMRTC1Q5HYR2 192 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 ZNF248Q8NDW4 579 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 CASTOR1Q8WTX7 329 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 ASB10Q8WXI3 467 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 AQP3Q92482 292 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 VRK1Q99986 396 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-217ENST00000495688 LOC390937A0A1W2PQ73 354 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 NPIPA5E9PKD4 350 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 IGHMP01871 453 aa11.61□□□□□ -0.55
PTPN7-217ENST00000495688 H2BFMP0C1H6 154 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms