RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 OR52D1Q9H346 318 aa9.8□□□□□ -0.84
VTI1A-208ENST00000494728 ADA2Q9NZK5 511 aa9.8□□□□□ -0.84
VTI1A-208ENST00000494728 SAMD4AQ9UPU9 718 aaKnown RBP9.8□□□□□ -0.84
VTI1A-208ENST00000494728 F5H0A9 414 aaPredicted RBP9.79□□□□□ -0.84
VTI1A-208ENST00000494728 ZNF205O95201 554 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 SBK2P0C263 348 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 HSD17B1P14061 328 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 HIST1H1CP16403 213 aaKnown RBP9.79□□□□□ -0.84
VTI1A-208ENST00000494728 PRDX6P30041 224 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 LIPAP38571 399 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 GYS2P54840 703 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 SPIBQ01892 262 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 COX10Q12887 443 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 TUSC1Q2TAM9 212 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 KRTAP27-1Q3LI81 207 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 KLF17Q5JT82 389 aaPredicted RBP9.79□□□□□ -0.84
VTI1A-208ENST00000494728 OR2T2Q6IF00 324 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 LYPD4Q6UWN0 246 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 BHLHE23Q8NDY6 225 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 SDR9C7Q8NEX9 313 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 SLC26A10Q8NG04 563 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 OR4K13Q8NH42 304 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 ZNF420Q8TAQ5 688 aaPredicted RBP9.79□□□□□ -0.84
VTI1A-208ENST00000494728 ZNRF4Q8WWF5 429 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 DVL3Q92997 716 aaPredicted RBP9.79□□□□□ -0.84
VTI1A-208ENST00000494728 HAVCR1Q96D42 359 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 PYURFQ96I23 114 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 SAMD8Q96LT4 415 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 ERMAPQ96PL5 475 aaPredicted RBP9.79□□□□□ -0.84
VTI1A-208ENST00000494728 DIRC2Q96SL1 478 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 KRTAP3-2Q9BYR7 98 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 C7orf69Q9H7B7 122 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 GORASP2Q9H8Y8 452 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 GCM1Q9NP62 436 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 PNRC2Q9NPJ4 139 aaKnown RBP9.79□□□□□ -0.84
VTI1A-208ENST00000494728 RPRD1BQ9NQG5 326 aaKnown RBP9.79□□□□□ -0.84
VTI1A-208ENST00000494728 ARL8BQ9NVJ2 186 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 CD300AQ9UGN4 299 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 PCDHB10Q9UN67 800 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 AURKCQ9UQB9 309 aa9.79□□□□□ -0.84
VTI1A-208ENST00000494728 FAM32AQ9Y421 112 aaKnown RBP9.79□□□□□ -0.84
VTI1A-208ENST00000494728 A0A0A6YYJ9 748 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 C5orf63A6NC05 138 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 OR6C68A6NDL8 312 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 J3QLI3 93 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 NDUFAB1O14561 156 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 GADD45GO95257 159 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 ANPEPP15144 967 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 RAC2P15153 192 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 ATP6V1B2P21281 511 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 FPR3P25089 353 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 CFPP27918 469 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 RRM2P31350 389 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 GGT2P36268 569 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 RPS27P42677 84 aaKnown RBP9.78□□□□□ -0.84
VTI1A-208ENST00000494728 GSSP48637 474 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 CENPAP49450 140 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 RPS6KA3P51812 740 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 BTG1P62324 171 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 SLC3A1Q07837 685 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 RFX4Q33E94 735 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 FAM201AQ5SY85 155 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 SLC18B1Q6NT16 456 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 ARL9Q6T311 187 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 FBXW12Q6X9E4 464 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 ZNF620Q6ZNG0 422 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 PEG10Q86TG7 708 aaKnown RBP9.78□□□□□ -0.84
VTI1A-208ENST00000494728 ZDHHC22Q8N966 263 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 OR10S1Q8NGN2 331 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 ZNF418Q8TF45 676 aaPredicted RBP9.78□□□□□ -0.84
VTI1A-208ENST00000494728 COQ7Q99807 217 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 PLA2G12AQ9BZM1 189 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 HDHD2Q9H0R4 259 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 EGLN3Q9H6Z9 239 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 PATZ1Q9HBE1 687 aaKnown RBP9.78□□□□□ -0.84
VTI1A-208ENST00000494728 SRA1Q9HD15 236 aaKnown RBP9.78□□□□□ -0.84
VTI1A-208ENST00000494728 MRPL22Q9NWU5 206 aaKnown RBP9.78□□□□□ -0.84
VTI1A-208ENST00000494728 IL19Q9UHD0 177 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 ATPIF1Q9UII2 106 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 B9D1Q9UPM9 204 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 POLR1DQ9Y2S0 133 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 BOLA1Q9Y3E2 137 aa9.78□□□□□ -0.84
VTI1A-208ENST00000494728 NOTCH1P46531 2555 aa9.77□□□□□ -0.84
VTI1A-208ENST00000494728 CEACAM18A8MTB9 384 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 A8MXK9 166 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 F5H5P2 479 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 TMEM178BH3BS89 294 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 ARPC3O15145 178 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 OR10H3O60404 316 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 CYB5R3P00387 301 aaPredicted RBP9.77□□□□□ -0.85
VTI1A-208ENST00000494728 PMELP40967 661 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 SLC6A9P48067 706 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 ACTG1P63261 375 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 PAX2Q02962 417 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 TMEM155Q4W5P6 130 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 PGBD2Q6P3X8 592 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 COLCA1Q6ZS62 124 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 USP43Q70EL4 1123 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 NAA40Q86UY6 237 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms