RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 OR51A2Q8NGJ7 313 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 OR6N1Q8NGY5 312 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 SMIM4Q8WVI0 70 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 SLC25A28Q96A46 364 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 ZNF837Q96EG3 531 aaPredicted RBP9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 PBOV1Q9GZY1 135 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 STEAP1Q9UHE8 339 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 NUFIP1Q9UHK0 495 aaKnown RBP9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 RCE1Q9Y256 329 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 POLR1DQ9Y2S0 133 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 RIF1Q5UIP0 2472 aaKnown RBP9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 FRYQ5TBA9 3013 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 FREM1Q5H8C1 2179 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 CFAP47Q6ZTR5 3102 aa9.38□□□□□ -0.91
PRPF4B-209ENST00000494674 SLC17A2O00624 439 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 DHHO43323 396 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 GLSO94925 669 aaPredicted RBP9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 CD2P06729 351 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 CD3GP09693 182 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 TMIGD3P0DMS9 266 aaPredicted RBP9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 PRKAR1AP10644 381 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 MNDAP41218 407 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 LHX2P50458 406 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 GPR176Q14439 515 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 TMEM244Q5VVB8 128 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 HACD4Q5VWC8 232 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 PRSS45Q7RTY3 260 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 OR13C3Q8NGS6 347 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 OR2AJ1Q8NGZ0 328 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 SYNPRQ8TBG9 265 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 ROBO4Q8WZ75 1007 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 HPS1Q92902 700 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 HAVCR1Q96D42 359 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 ITPKCQ96DU7 683 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 ZNF845Q96IR2 970 aaPredicted RBP9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 FER1L6-AS2Q96M78 137 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 TTTY12Q9BZ98 90 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 HDHD2Q9H0R4 259 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 NELFAQ9H3P2 528 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 AUNIPQ9H7T9 357 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 FAM86C1Q9NVL1 165 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 ABI3Q9P2A4 366 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 ZNF319Q9P2F9 582 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 ZFHX2Q9C0A1 2572 aaPredicted RBP9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 GVINP1Q7Z2Y8 2422 aa9.37□□□□□ -0.91
PRPF4B-209ENST00000494674 MEIOCA2RUB1 952 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 LINC01387J3KSC0 135 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 TFECO14948 347 aaPredicted RBP9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 NME2P1O60361 137 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 CYTIPO60759 359 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 NME2P22392 152 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 CTSSP25774 331 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 SLC6A1P30531 599 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 SRP9P49458 86 aaKnown RBP9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 EFNB2P52799 333 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 CLDN18P56856 261 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 SOX8P57073 446 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 PITPNAQ00169 270 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 SRSF6Q13247 344 aaKnown RBP9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 PLA1AQ53H76 456 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 ZNF57Q68EA5 555 aaPredicted RBP9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 MZT2BQ6NZ67 158 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 ZNF529Q6P280 563 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 KLHL24Q6TFL4 600 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 LINGO2Q7L985 606 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 SERPINA12Q8IW75 414 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 GALNT16Q8N428 558 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 TMEM251Q8N6I4 163 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 PLPP7Q8NBV4 271 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 CLEC1AQ8NC01 280 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 ENKURQ8TC29 256 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 RAB40AQ8WXH6 277 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 GCDHQ92947 438 aaPredicted RBP9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 ZNF775Q96BV0 537 aaPredicted RBP9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 UPRTQ96BW1 309 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 INTS12Q96CB8 462 aaKnown RBP9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 ZFP3Q96NJ6 502 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 NKX3-1Q99801 234 aaPredicted RBP9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 KCNK15Q9H427 330 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 NIPAL2Q9H841 368 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 MOB1AQ9H8S9 216 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 RNF121Q9H920 327 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 PLEKHA1Q9HB21 404 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 ZNF275Q9NSD4 429 aaPredicted RBP9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 NPAP1Q9NZP6 1156 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 RABL2AQ9UBK7 228 aaPredicted RBP9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 RABL2BQ9UNT1 228 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 MRPS7Q9Y2R9 242 aaKnown RBP9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 ARHGAP21Q5T5U3 1957 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 ZFHX4Q86UP3 3567 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 AKAP13Q12802 2813 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 PRRC2CQ9Y520 2896 aaKnown RBP9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 LOC390937A0A1W2PQ73 354 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 C5orf63A6NC05 138 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 OR5H15A6NDH6 313 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 E9PLN8 166 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 SP1P08047 785 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 CDK2P24941 298 aa9.36□□□□□ -0.91
PRPF4B-209ENST00000494674 MAGEA5P43359 124 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms