RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 ELMOD3Q96FG2 381 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 C1orf159Q96HA4 380 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 EGLN1Q9GZT9 426 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 HDHD2Q9H0R4 259 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 TBC1D23Q9NUY8 699 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 IL20Q9NYY1 176 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 KLHL21Q9UJP4 597 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 PURGQ9UJV8 347 aaKnown RBP28.23■■■□□ 2.11
CBX4-203ENST00000494546 ZDHHC8Q9ULC8 765 aa28.23■■■□□ 2.11
CBX4-203ENST00000494546 HNF1AP20823 631 aa28.22■■■□□ 2.11
CBX4-203ENST00000494546 MICAQ29983 383 aa28.22■■■□□ 2.11
CBX4-203ENST00000494546 CR1LQ2VPA4 569 aa28.22■■■□□ 2.11
CBX4-203ENST00000494546 SLC36A3Q495N2 470 aa28.22■■■□□ 2.11
CBX4-203ENST00000494546 CYB561A3Q8NBI2 242 aa28.22■■■□□ 2.11
CBX4-203ENST00000494546 COG8Q96MW5 612 aa28.22■■■□□ 2.11
CBX4-203ENST00000494546 COQ7Q99807 217 aa28.22■■■□□ 2.11
CBX4-203ENST00000494546 CDADC1Q9BWV3 514 aa28.22■■■□□ 2.11
CBX4-203ENST00000494546 ACOT8O14734 319 aa28.21■■■□□ 2.11
CBX4-203ENST00000494546 RAP2AP10114 183 aa28.21■■■□□ 2.11
CBX4-203ENST00000494546 SRD5A1P18405 259 aa28.21■■■□□ 2.11
CBX4-203ENST00000494546 CCL17Q92583 94 aa28.21■■■□□ 2.11
CBX4-203ENST00000494546 DCLRE1CQ96SD1 692 aaKnown RBP28.21■■■□□ 2.11
CBX4-203ENST00000494546 DIRC2Q96SL1 478 aa28.21■■■□□ 2.11
CBX4-203ENST00000494546 TSSK6Q9BXA6 273 aa28.21■■■□□ 2.11
CBX4-203ENST00000494546 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP28.2■■■□□ 2.112e-8■■■■■ 39.6
CBX4-203ENST00000494546 B4DSR2 109 aa28.2■■■□□ 2.1
CBX4-203ENST00000494546 CLDN25C9JDP6 229 aa28.2■■■□□ 2.1
CBX4-203ENST00000494546 UBOX5O94941 541 aa28.2■■■□□ 2.1
CBX4-203ENST00000494546 ADH4P08319 380 aa28.2■■■□□ 2.1
CBX4-203ENST00000494546 PYCR1P32322 319 aa28.2■■■□□ 2.1
CBX4-203ENST00000494546 RGS6P49758 472 aa28.2■■■□□ 2.1
CBX4-203ENST00000494546 TRAP1Q12931 704 aaKnown RBP28.2■■■□□ 2.1
CBX4-203ENST00000494546 OR2AJ1Q8NGZ0 328 aa28.2■■■□□ 2.1
CBX4-203ENST00000494546 PITX2Q99697 317 aa28.2■■■□□ 2.1
CBX4-203ENST00000494546 CHID1Q9BWS9 393 aa28.2■■■□□ 2.1
CBX4-203ENST00000494546 PTTG3PQ9NZH4 202 aa28.2■■■□□ 2.1
CBX4-203ENST00000494546 SOX14O95416 240 aa28.19■■■□□ 2.1
CBX4-203ENST00000494546 SLC18B1Q6NT16 456 aa28.19■■■□□ 2.1
CBX4-203ENST00000494546 CFAP77Q6ZQR2 320 aa28.19■■■□□ 2.1
CBX4-203ENST00000494546 PROKR2Q8NFJ6 384 aa28.19■■■□□ 2.1
CBX4-203ENST00000494546 PTP4A1Q93096 173 aa28.19■■■□□ 2.1
CBX4-203ENST00000494546 HAVCR1Q96D42 359 aa28.19■■■□□ 2.1
CBX4-203ENST00000494546 LPAR2Q9HBW0 351 aa28.19■■■□□ 2.1
CBX4-203ENST00000494546 FAM157AC9JC47 383 aa28.18■■■□□ 2.1
CBX4-203ENST00000494546 GYG2O15488 501 aa28.18■■■□□ 2.1
CBX4-203ENST00000494546 KITLGP21583 273 aa28.18■■■□□ 2.1
CBX4-203ENST00000494546 ERFP50548 548 aa28.18■■■□□ 2.1
CBX4-203ENST00000494546 TNFAIP6P98066 277 aaPredicted RBP28.18■■■□□ 2.1
CBX4-203ENST00000494546 HLXQ14774 488 aaPredicted RBP28.18■■■□□ 2.1
CBX4-203ENST00000494546 SPRNQ5BIV9 151 aa28.18■■■□□ 2.1
CBX4-203ENST00000494546 ADGRG5Q8IZF4 528 aa28.18■■■□□ 2.1
CBX4-203ENST00000494546 OR10G2Q8NGC3 310 aa28.18■■■□□ 2.1
CBX4-203ENST00000494546 OR5L1Q8NGL2 311 aa28.18■■■□□ 2.1
CBX4-203ENST00000494546 APOBEC3DQ96AK3 386 aaPredicted RBP28.18■■■□□ 2.1
CBX4-203ENST00000494546 TIMD4Q96H15 378 aa28.18■■■□□ 2.1
CBX4-203ENST00000494546 DGCR6LQ9BY27 220 aa28.18■■■□□ 2.1
CBX4-203ENST00000494546 MRPL22Q9NWU5 206 aaKnown RBP28.18■■■□□ 2.1
CBX4-203ENST00000494546 TMEFF2Q9UIK5 374 aaPredicted RBP28.18■■■□□ 2.1
CBX4-203ENST00000494546 WIPI2Q9Y4P8 454 aa28.18■■■□□ 2.1
CBX4-203ENST00000494546 J3QW42 95 aa28.17■■■□□ 2.1
CBX4-203ENST00000494546 CST1P01037 141 aa28.17■■■□□ 2.1
CBX4-203ENST00000494546 ZNF823P16415 610 aa28.17■■■□□ 2.1
CBX4-203ENST00000494546 GGT2P36268 569 aa28.17■■■□□ 2.1
CBX4-203ENST00000494546 DVL1P1P54792 670 aaPredicted RBP28.17■■■□□ 2.1
CBX4-203ENST00000494546 LMO4P61968 165 aa28.17■■■□□ 2.1
CBX4-203ENST00000494546 CDK5R2Q13319 367 aa28.17■■■□□ 2.1
CBX4-203ENST00000494546 LNX2Q8N448 690 aa28.17■■■□□ 2.1
CBX4-203ENST00000494546 SLC37A3Q8NCC5 494 aa28.17■■■□□ 2.1
CBX4-203ENST00000494546 OR2Z1Q8NG97 314 aa28.17■■■□□ 2.1
CBX4-203ENST00000494546 OR2T4Q8NH00 348 aa28.17■■■□□ 2.1
CBX4-203ENST00000494546 DDOQ99489 341 aa28.17■■■□□ 2.1
CBX4-203ENST00000494546 ARMC1Q9NVT9 282 aa28.17■■■□□ 2.1
CBX4-203ENST00000494546 CYB5R1Q9UHQ9 305 aa28.17■■■□□ 2.1
CBX4-203ENST00000494546 CD55P08174 381 aa28.16■■■□□ 2.1
CBX4-203ENST00000494546 RAC2P15153 192 aa28.16■■■□□ 2.1
CBX4-203ENST00000494546 DNAL1Q4LDG9 190 aa28.16■■■□□ 2.1
CBX4-203ENST00000494546 ZNF362Q5T0B9 420 aaPredicted RBP28.16■■■□□ 2.1
CBX4-203ENST00000494546 Q6ZR03 302 aa28.16■■■□□ 2.1
CBX4-203ENST00000494546 GLCCI1Q86VQ1 547 aa28.16■■■□□ 2.1
CBX4-203ENST00000494546 OR5AS1Q8N127 324 aa28.16■■■□□ 2.1
CBX4-203ENST00000494546 OR51L1Q8NGJ5 315 aa28.16■■■□□ 2.1
CBX4-203ENST00000494546 OR4Q3Q8NH05 313 aa28.16■■■□□ 2.1
CBX4-203ENST00000494546 CANT1Q8WVQ1 401 aa28.16■■■□□ 2.1
CBX4-203ENST00000494546 RAB1CQ92928 201 aa28.16■■■□□ 2.1
CBX4-203ENST00000494546 BAIAP2Q9UQB8 552 aa28.16■■■□□ 2.1
CBX4-203ENST00000494546 DHRS12A0PJE2 317 aa28.15■■■□□ 2.1
CBX4-203ENST00000494546 AQP12BA6NM10 295 aa28.15■■■□□ 2.1
CBX4-203ENST00000494546 F5H5K5 113 aa28.15■■■□□ 2.1
CBX4-203ENST00000494546 TNFSF4P23510 183 aa28.15■■■□□ 2.1
CBX4-203ENST00000494546 AQP12AQ8IXF9 295 aa28.15■■■□□ 2.1
CBX4-203ENST00000494546 OR2T33Q8NG76 320 aa28.15■■■□□ 2.1
CBX4-203ENST00000494546 OR9Q1Q8NGQ5 310 aa28.15■■■□□ 2.1
CBX4-203ENST00000494546 ATF6BQ99941 703 aa28.15■■■□□ 2.1
CBX4-203ENST00000494546 NIPSNAP1Q9BPW8 284 aa28.15■■■□□ 2.1
CBX4-203ENST00000494546 TVP23AA6NH52 213 aa28.14■■■□□ 2.1
CBX4-203ENST00000494546 ECH1Q13011 328 aa28.14■■■□□ 2.1
CBX4-203ENST00000494546 RSPO1Q2MKA7 263 aaPredicted RBP28.14■■■□□ 2.1
CBX4-203ENST00000494546 GIPC3Q8TF64 312 aa28.14■■■□□ 2.1
CBX4-203ENST00000494546 ZNRF4Q8WWF5 429 aa28.14■■■□□ 2.1
CBX4-203ENST00000494546 ZNF665Q9H7R5 613 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms