RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 ISL1P61371 349 aa15.42■□□□□ 0.06
PDLIM7-208ENST00000493815 NKX6-1P78426 367 aaPredicted RBP15.42■□□□□ 0.06
PDLIM7-208ENST00000493815 MEDAGQ5VYS4 303 aa15.42■□□□□ 0.06
PDLIM7-208ENST00000493815 NAA40Q86UY6 237 aa15.42■□□□□ 0.06
PDLIM7-208ENST00000493815 RNFT2Q96EX2 444 aa15.42■□□□□ 0.06
PDLIM7-208ENST00000493815 C4orf45Q96LM5 186 aa15.42■□□□□ 0.06
PDLIM7-208ENST00000493815 COPS4Q9BT78 406 aa15.42■□□□□ 0.06
PDLIM7-208ENST00000493815 HAO2Q9NYQ3 351 aa15.42■□□□□ 0.06
PDLIM7-208ENST00000493815 LAMP5Q9UJQ1 280 aa15.42■□□□□ 0.06
PDLIM7-208ENST00000493815 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.42■□□□□ 0.064e-7■■■■■ 30.8
PDLIM7-208ENST00000493815 CYSRT1A8MQ03 144 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 PRR32B1ATL7 298 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 H0YJX3 145 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 ABHD16AO95870 558 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 ALOX5APP20292 161 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 MSMPQ1L6U9 139 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 SPATA46Q5T0L3 261 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 RFPL4BQ6ZWI9 263 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 USP51Q70EK9 711 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 SLC35F2Q8IXU6 374 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 C8orf59Q8N0T1 100 aaPredicted RBP15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 ABHD4Q8TB40 342 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 LURAP1Q96LR2 239 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 COQ7Q99807 217 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 YIPF3Q9GZM5 350 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 MAGEB4O15481 346 aaPredicted RBP15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 SMPD2O60906 423 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 SOD3P08294 240 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 ANOS1P23352 680 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 FABP6P51161 128 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 ZNF91Q05481 1191 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 IL18R1Q13478 541 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 TAF13Q15543 124 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 ZNF454Q8N9F8 522 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 SETD9Q8NE22 299 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 NUP37Q8NFH4 326 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 OR10H4Q8NGA5 316 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 TMEM171Q8WVE6 324 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 RNF133Q8WVZ7 376 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 Q96MT0 163 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 DDX28Q9NUL7 540 aaKnown RBP15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 EIF3KQ9UBQ5 218 aaKnown RBP15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 SPEF1Q9Y4P9 236 aa15.41■□□□□ 0.06
PDLIM7-208ENST00000493815 ZNF878C9JN71 531 aa15.4■□□□□ 0.06
PDLIM7-208ENST00000493815 LCKP06239 509 aa15.4■□□□□ 0.06
PDLIM7-208ENST00000493815 DBTP11182 482 aaKnown RBP15.4■□□□□ 0.06
PDLIM7-208ENST00000493815 PRKXP51817 358 aa15.4■□□□□ 0.06
PDLIM7-208ENST00000493815 CXCR4P61073 352 aa15.4■□□□□ 0.06
PDLIM7-208ENST00000493815 ADIPOQQ15848 244 aa15.4■□□□□ 0.06
PDLIM7-208ENST00000493815 KRTAP27-1Q3LI81 207 aa15.4■□□□□ 0.06
PDLIM7-208ENST00000493815 LRRN1Q6UXK5 716 aa15.4■□□□□ 0.06
PDLIM7-208ENST00000493815 SSX6Q7RTT6 188 aa15.4■□□□□ 0.06
PDLIM7-208ENST00000493815 OR1J1Q8NGS3 322 aa15.4■□□□□ 0.06
PDLIM7-208ENST00000493815 DHRS9Q9BPW9 319 aa15.4■□□□□ 0.06
PDLIM7-208ENST00000493815 POFUT1Q9H488 388 aa15.4■□□□□ 0.06
PDLIM7-208ENST00000493815 ATPIF1Q9UII2 106 aa15.4■□□□□ 0.06
PDLIM7-208ENST00000493815 LAMP3Q9UQV4 416 aa15.4■□□□□ 0.06
PDLIM7-208ENST00000493815 PLEKHA6Q9Y2H5 1048 aa15.4■□□□□ 0.06
PDLIM7-208ENST00000493815 N6AMT1Q9Y5N5 214 aa15.4■□□□□ 0.06
PDLIM7-208ENST00000493815 A0A1W2PQL4 384 aaPredicted RBP15.39■□□□□ 0.05
PDLIM7-208ENST00000493815 OR4A8P0C604 315 aa15.39■□□□□ 0.05
PDLIM7-208ENST00000493815 ACSM4P0C7M7 580 aa15.39■□□□□ 0.05
PDLIM7-208ENST00000493815 SLC2A1P11166 492 aa15.39■□□□□ 0.05
PDLIM7-208ENST00000493815 PCSK6P29122 969 aa15.39■□□□□ 0.05
PDLIM7-208ENST00000493815 TTKP33981 857 aa15.39■□□□□ 0.05
PDLIM7-208ENST00000493815 OPRL1P41146 370 aa15.39■□□□□ 0.05
PDLIM7-208ENST00000493815 ECH1Q13011 328 aa15.39■□□□□ 0.05
PDLIM7-208ENST00000493815 CDK5R2Q13319 367 aa15.39■□□□□ 0.05
PDLIM7-208ENST00000493815 ZNF611Q8N823 705 aa15.39■□□□□ 0.05
PDLIM7-208ENST00000493815 SLCO1C1Q9NYB5 712 aa15.39■□□□□ 0.05
PDLIM7-208ENST00000493815 NOTCH2Q04721 2471 aa15.39■□□□□ 0.05
PDLIM7-208ENST00000493815 C5orf63A6NC05 138 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 SNTNA6NMZ2 147 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 M0R135 149 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 H2BFMP0C1H6 154 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 DANCRP0C864 163 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 APOBEC3AP31941 199 aaPredicted RBP15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 RAD52P43351 418 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 SLC6A9P48067 706 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 POU4F2Q12837 409 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 TMED1Q13445 227 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 LAIR2Q6ISS4 152 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 LRP11Q86VZ4 500 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 MUC15Q8N387 334 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 SPTSSAQ969W0 71 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 LGALS12Q96DT0 336 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 ZNF799Q96GE5 643 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 RHNO1Q9BSD3 238 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 STARD10Q9Y365 291 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 CD8AP01732 235 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 GLRXP35754 106 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 SERPINF1P36955 418 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 SLC15A1P46059 708 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 TPTEP56180 551 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 PPP1CBP62140 327 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 SNCBQ16143 134 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 PAMR1Q6UXH9 720 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 THAP5Q7Z6K1 395 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 KRT77Q7Z794 578 aa15.38■□□□□ 0.05
PDLIM7-208ENST00000493815 SYT3Q9BQG1 590 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms