RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 DOK2O60496 412 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 RAD1O60671 282 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 VAMP5O95183 116 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 DCNP07585 359 aaKnown RBP8.6□□□□□ -1.03
NPHP3-209ENST00000493732 ACSM4P0C7M7 580 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 PTHLHP12272 177 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 RAB3AP20336 220 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 TAF13Q15543 124 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 CLLU1Q5K131 121 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 CLVS2Q5SYC1 327 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 NHLRC1Q6VVB1 395 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 ZNF813Q6ZN06 617 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 MDGA2Q7Z553 956 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 LINC00346Q8IVM7 164 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 OR8H3Q8N146 312 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 FADS6Q8N9I5 356 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 OR1M1Q8NGA1 313 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 OR10G3Q8NGC4 313 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 OR51S1Q8NGJ8 323 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 POC1BQ8TC44 478 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 TNFAIP8L1Q8WVP5 186 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 PPP1R14AQ96A00 147 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 PNPLA2Q96AD5 504 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 MS4A3Q96HJ5 214 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 PBOV1Q9GZY1 135 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 HEXA-AS1Q9H8Q6 139 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 B3GAT1Q9P2W7 334 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 SLC5A6Q9Y289 635 aa8.6□□□□□ -1.03
NPHP3-209ENST00000493732 MRPS18BQ9Y676 258 aaKnown RBP8.6□□□□□ -1.03
NPHP3-209ENST00000493732 ASXL3Q9C0F0 2248 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 A0A1W2PPL8 197 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 PLSCR5A0PG75 271 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 H3BSH0 61 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 P2RY10O00398 339 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 EIF1BO60739 113 aaKnown RBP8.59□□□□□ -1.03
NPHP3-209ENST00000493732 KDM4BO94953 1096 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 TTRP02766 147 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 CD74P04233 296 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 CD3DP04234 171 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 ITGB2P05107 769 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 CHRM2P08172 466 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 PGA4P0DJD7 388 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 PGA3P0DJD8 388 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 ZNF20P17024 532 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 TBPP20226 339 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 MPZP25189 248 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 GNALP38405 381 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 GRB2P62993 217 aaKnown RBP8.59□□□□□ -1.03
NPHP3-209ENST00000493732 GABREP78334 506 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 SPOCK1Q08629 439 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 PMPCAQ10713 525 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 PLA2G7Q13093 441 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 GRK1Q15835 563 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 FAAP20Q6NZ36 180 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 LPCAT3Q6P1A2 487 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 SLC25A47Q6Q0C1 308 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 LYPD6Q86Y78 171 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 ZNF584Q8IVC4 421 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 DTWD2Q8NBA8 298 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 AGBL5Q8NDL9 886 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 CCDC54Q8NEL0 328 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 OR2AK2Q8NG84 335 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 M1APQ8TC57 530 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 FGGYQ96C11 551 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 OR5B2Q96R09 309 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 PRRT1Q99946 306 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 DPCDQ9BVM2 203 aaPredicted RBP8.59□□□□□ -1.03
NPHP3-209ENST00000493732 CHIAQ9BZP6 476 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 PIPOXQ9P0Z9 390 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 GDF2Q9UK05 429 aaPredicted RBP8.59□□□□□ -1.03
NPHP3-209ENST00000493732 ADAMTS9Q9P2N4 1935 aa8.59□□□□□ -1.03
NPHP3-209ENST00000493732 SZT2Q5T011 3432 aa8.59□□□□□ -1.04
NPHP3-209ENST00000493732 AQP7P3A6NL99 342 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 F5H5P2 479 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 H3BUI4 141 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 TRAF3IP2O43734 574 aaPredicted RBP8.58□□□□□ -1.04
NPHP3-209ENST00000493732 EFNA2O43921 213 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 DKK1O94907 266 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 IGHEP01854 428 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 ZNF24P17028 368 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 LSM6P62312 80 aaKnown RBP8.58□□□□□ -1.04
NPHP3-209ENST00000493732 FGL1Q08830 312 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 OPCMLQ14982 345 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 C4orf46Q504U0 113 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 OR2W3Q7Z3T1 314 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 GTPBP8Q8N3Z3 284 aaPredicted RBP8.58□□□□□ -1.04
NPHP3-209ENST00000493732 BMPERQ8N8U9 685 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 INTS12Q96CB8 462 aaKnown RBP8.58□□□□□ -1.04
NPHP3-209ENST00000493732 CITED4Q96RK1 184 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 B3GNT4Q9C0J1 378 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 ZNF700Q9H0M5 742 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 GAREM1Q9H706 876 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 SEC61A2Q9H9S3 476 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 SLC2A8Q9NY64 477 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 CGGBP1Q9UFW8 167 aaPredicted RBP8.58□□□□□ -1.04
NPHP3-209ENST00000493732 PLEKHA6Q9Y2H5 1048 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 AUP1Q9Y679 476 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 ARID1BQ8NFD5 2236 aaPredicted RBP8.58□□□□□ -1.04
NPHP3-209ENST00000493732 CABIN1Q9Y6J0 2220 aa8.58□□□□□ -1.04
NPHP3-209ENST00000493732 TMEM82A0PJX8 343 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms