RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 C1orf174Q8IYL3 243 aa10.82□□□□□ -0.68
SNX17-208ENST00000493711 ZNF679Q8IYX0 411 aa10.82□□□□□ -0.68
SNX17-208ENST00000493711 SYS1Q8N2H4 156 aa10.82□□□□□ -0.68
SNX17-208ENST00000493711 FGFBP3Q8TAT2 258 aa10.82□□□□□ -0.68
SNX17-208ENST00000493711 HTRA1Q92743 480 aa10.82□□□□□ -0.68
SNX17-208ENST00000493711 MAP6Q96JE9 813 aa10.82□□□□□ -0.68
SNX17-208ENST00000493711 WFIKKN1Q96NZ8 548 aa10.82□□□□□ -0.68
SNX17-208ENST00000493711 SPOCK3Q9BQ16 436 aa10.82□□□□□ -0.68
SNX17-208ENST00000493711 KCNS3Q9BQ31 491 aa10.82□□□□□ -0.68
SNX17-208ENST00000493711 CENPMQ9NSP4 180 aa10.82□□□□□ -0.68
SNX17-208ENST00000493711 ERGIC3Q9Y282 383 aa10.82□□□□□ -0.68
SNX17-208ENST00000493711 CAB39Q9Y376 341 aaPredicted RBP10.82□□□□□ -0.68
SNX17-208ENST00000493711 METTL15A6NJ78 407 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 ACOD1A6NK06 481 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 J3QW42 95 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 SYNGR3O43761 229 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 PATE4P0C8F1 98 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 ZNF14P17017 642 aaPredicted RBP10.81□□□□□ -0.68
SNX17-208ENST00000493711 IGFBP2P18065 325 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 TUBG1P23258 451 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 STOMP27105 288 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 HSD11B1P28845 292 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 OPRL1P41146 370 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 HTR5AP47898 357 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 RGS6P49758 472 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 RIDAP52758 137 aaKnown RBP10.81□□□□□ -0.68
SNX17-208ENST00000493711 NR1H2P55055 460 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 TPTEP56180 551 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 RAB39AQ14964 217 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 CDONQ4KMG0 1287 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 CCDC92Q53HC0 331 aaPredicted RBP10.81□□□□□ -0.68
SNX17-208ENST00000493711 BEX5Q5H9J7 111 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 ZNF774Q6NX45 483 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 TMEM154Q6P9G4 183 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 SEZ6L2Q6UXD5 910 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 CFAP77Q6ZQR2 320 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 DMRTC2Q8IXT2 367 aaPredicted RBP10.81□□□□□ -0.68
SNX17-208ENST00000493711 KLHL36Q8N4N3 616 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 SVOPQ8N4V2 548 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 SLC30A7Q8NEW0 376 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 OR52N1Q8NH53 320 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 RADILQ96JH8 1075 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 OR8B4Q96RC9 309 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 KCNJ15Q99712 375 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 ESRP2Q9H6T0 727 aaKnown RBP10.81□□□□□ -0.68
SNX17-208ENST00000493711 ZFAND3Q9H8U3 227 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 TUBG2Q9NRH3 451 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 ERVK13-1Q9NX77 482 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 EIF3KQ9UBQ5 218 aaKnown RBP10.81□□□□□ -0.68
SNX17-208ENST00000493711 IKZF2Q9UKS7 526 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 SPEF1Q9Y4P9 236 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 SNX5Q9Y5X3 404 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 SPTAN1Q13813 2472 aaKnown RBP10.81□□□□□ -0.68
SNX17-208ENST00000493711 ARHGAP21Q5T5U3 1957 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 MED12LQ86YW9 2145 aa10.81□□□□□ -0.68
SNX17-208ENST00000493711 A0A1W2PR80 420 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 TMEM129A0AVI4 362 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 ZNF503-AS2A6NEH8 195 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 PRSS44E7EML9 344 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 MYL12BO14950 172 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 APOL3O95236 402 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 CRYAAP02489 173 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 MT-ND5P03915 603 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 THBDP07204 575 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 RPSAP08865 295 aaKnown RBP10.8□□□□□ -0.68
SNX17-208ENST00000493711 CRYGSP22914 178 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 GRNP28799 593 aaKnown RBP10.8□□□□□ -0.68
SNX17-208ENST00000493711 RPS27P42677 84 aaKnown RBP10.8□□□□□ -0.68
SNX17-208ENST00000493711 ZNF83P51522 516 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 IDH3GP51553 393 aaPredicted RBP10.8□□□□□ -0.68
SNX17-208ENST00000493711 HCCSP53701 268 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 TUBA1BP68363 451 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 TUBA4AP68366 448 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 ZNF85Q03923 595 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 ZNF829Q3KNS6 432 aaPredicted RBP10.8□□□□□ -0.68
SNX17-208ENST00000493711 DRAM2Q6UX65 266 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 TUBA1AQ71U36 451 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 WFDC8Q8IUA0 241 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 ACBD4Q8NC06 268 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 AKR7LQ8NHP1 331 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 COG8Q96MW5 612 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 ZNF75AQ96N20 296 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 TBX5Q99593 518 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 ALG8Q9BVK2 526 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 MND1Q9BWT6 205 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 ZNF696Q9H7X3 374 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 ELOVL3Q9HB03 270 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 CDH20Q9HBT6 801 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 PNRC2Q9NPJ4 139 aaKnown RBP10.8□□□□□ -0.68
SNX17-208ENST00000493711 COPS3Q9UNS2 423 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 KLHDC2Q9Y2U9 406 aa10.8□□□□□ -0.68
SNX17-208ENST00000493711 UTP20O75691 2785 aaKnown RBP10.8□□□□□ -0.68
SNX17-208ENST00000493711 A0A087WXM4 84 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 TRIM64A6NGJ6 449 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 M0R1B8 84 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 LIMS3P0CW19 117 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 LIMS4P0CW20 117 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 APEX1P27695 318 aaKnown RBP10.79□□□□□ -0.68
SNX17-208ENST00000493711 PCSK6P29122 969 aa10.79□□□□□ -0.68
SNX17-208ENST00000493711 OTX1P32242 354 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms