RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 MOSPD2Q8NHP6 518 aa11.77□□□□□ -0.53
PRPF40A-211ENST00000493468 ERGIC1Q969X5 290 aa11.77□□□□□ -0.53
PRPF40A-211ENST00000493468 SGTBQ96EQ0 304 aa11.77□□□□□ -0.53
PRPF40A-211ENST00000493468 TECTBQ96PL2 329 aa11.77□□□□□ -0.53
PRPF40A-211ENST00000493468 POLE4Q9NR33 117 aa11.77□□□□□ -0.53
PRPF40A-211ENST00000493468 FBLN5Q9UBX5 448 aa11.77□□□□□ -0.53
PRPF40A-211ENST00000493468 A0A1W2PPL8 197 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 BTBD17A6NE02 478 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 EVPLLA8MZ36 301 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 SGCEO43556 437 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 IRF2P14316 349 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 CD247P20963 164 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 PMELP40967 661 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 RGS6P49758 472 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 RPL27P61353 136 aaKnown RBP11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 COX10Q12887 443 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 MPP2Q14168 576 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 KCNJ8Q15842 424 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 C11orf88Q6PI97 169 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 CLDN22Q8N7P3 220 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 C11orf65Q8NCR3 313 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 PFN4Q8NHR9 129 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 CFHR4Q92496 578 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 LHX4Q969G2 390 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 RASD2Q96D21 266 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 ZNF582Q96NG8 517 aaPredicted RBP11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 OR52B2Q96RD2 323 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 AURKAIP1Q9NWT8 199 aaPredicted RBP11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 ZNRD1Q9P1U0 126 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 ERVK-18Q9QC07 812 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 CTSZQ9UBR2 303 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 ATPIF1Q9UII2 106 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 HIF3AQ9Y2N7 669 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 USH1CQ9Y6N9 552 aa11.76□□□□□ -0.53
PRPF40A-211ENST00000493468 IQCF6A8MYZ5 107 aa11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 F5H5P2 479 aa11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 M0QX08 132 aa11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 XPNPEP2O43895 674 aa11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 OPN1SWP03999 348 aa11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 FBP1P09467 338 aa11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 KITP10721 976 aa11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 ALG10Q5BKT4 473 aa11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 OR2T2Q6IF00 324 aa11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 BLOC1S3Q6QNY0 202 aa11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 MAVSQ7Z434 540 aa11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 IGFN1Q86VF2 1251 aa11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 PIP4P2Q8N4L2 257 aa11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 OR5L1Q8NGL2 311 aa11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 OR11L1Q8NGX0 322 aa11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 LRRC8CQ8TDW0 803 aa11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 NPRL2Q8WTW4 380 aa11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 C20orf141Q9NUB4 165 aa11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 CAB39Q9Y376 341 aaPredicted RBP11.75□□□□□ -0.53
PRPF40A-211ENST00000493468 OR6C6A6NF89 314 aa11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 A6NIZ1 184 aa11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 RNASEK-C17orf49H0YIS7 233 aa11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 RGS16O15492 202 aaPredicted RBP11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 SCG5P05408 212 aa11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 RAD23AP54725 363 aa11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 RAP1BP61224 184 aa11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 STX1BP61266 288 aa11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 RAP1AP62834 184 aa11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 TOP3AQ13472 1001 aaPredicted RBP11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 AQP6Q13520 282 aa11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 PAGE3Q5JUK9 113 aa11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 CLEC12AQ5QGZ9 265 aa11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 METAP1DQ6UB28 335 aaPredicted RBP11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 PATL1Q86TB9 770 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 FUNDC1Q8IVP5 155 aa11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 TMEM255BQ8WV15 326 aa11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 TMEM239Q8WW34 195 aa11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 SPDL1Q96EA4 605 aa11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 CPPED1Q9BRF8 314 aaPredicted RBP11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 POLR2J2Q9GZM3 115 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 POLR2J3Q9H1A7 115 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 TMCC3Q9ULS5 477 aa11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 FAM96BQ9Y3D0 163 aa11.74□□□□□ -0.53
PRPF40A-211ENST00000493468 HTR3EA5X5Y0 456 aa11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 NDUFA2O43678 99 aa11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 ECDO95905 644 aaPredicted RBP11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 GABRA5P31644 462 aa11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 CD200P41217 278 aa11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 EFNB2P52799 333 aa11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 LAPTM4AQ15012 233 aa11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 KRT71Q3SY84 523 aa11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 NKAIN4Q8IVV8 208 aa11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 SPERTQ8NA61 448 aa11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 OR5R1Q8NH85 324 aa11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 RASSF5Q8WWW0 418 aa11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 APOBEC3DQ96AK3 386 aaPredicted RBP11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 MMADHCQ9H3L0 296 aaPredicted RBP11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 EMC7Q9NPA0 242 aa11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 TRIM36Q9NQ86 728 aa11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 TMEM100Q9NV29 134 aa11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 PTTG3PQ9NZH4 202 aa11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 KPTNQ9Y664 436 aa11.73□□□□□ -0.53
PRPF40A-211ENST00000493468 IGHV3-64DA0A0J9YX35 117 aa11.72□□□□□ -0.53
PRPF40A-211ENST00000493468 A0A1B0GVI7 797 aa11.72□□□□□ -0.53
PRPF40A-211ENST00000493468 LGALS8O00214 317 aa11.72□□□□□ -0.53
PRPF40A-211ENST00000493468 FAM20BO75063 409 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms