RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 EGLN1Q9GZT9 426 aa12.85□□□□□ -0.35
USP39-217ENST00000491659 VNN3Q9NY84 501 aa12.85□□□□□ -0.35
USP39-217ENST00000491659 IL20Q9NYY1 176 aa12.85□□□□□ -0.35
USP39-217ENST00000491659 ZDHHC8Q9ULC8 765 aa12.85□□□□□ -0.35
USP39-217ENST00000491659 AQP12BA6NM10 295 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 CLDN25C9JDP6 229 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 BHLHE40O14503 412 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 GYG2O15488 501 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 UBOX5O94941 541 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 TFP02787 698 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 CDH15P55291 814 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 HIST1H3AP68431 136 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 PSG7Q13046 419 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 HIST2H3PS2Q5TEC6 136 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 HIST2H3AQ71DI3 136 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 AQP12AQ8IXF9 295 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 PROKR2Q8NFJ6 384 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 OR10G2Q8NGC3 310 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 CLDND2Q8NHS1 167 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 TIMD4Q96H15 378 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 DGCR6LQ9BY27 220 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 POFUT1Q9H488 388 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 BAIAP2Q9UQB8 552 aa12.84□□□□□ -0.35
USP39-217ENST00000491659 DHRS12A0PJE2 317 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 ACOT8O14734 319 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 SOX14O95416 240 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 CST1P01037 141 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 ADH4P08319 380 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 DBHP09172 617 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 ZNF823P16415 610 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 HOXB6P17509 224 aaKnown RBP12.83□□□□□ -0.36
USP39-217ENST00000491659 PCMT1P22061 227 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 TNFSF4P23510 183 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 FLOT2Q14254 428 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 FAM120AOSQ5T036 256 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 SLC18B1Q6NT16 456 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 CORO6Q6QEF8 472 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 LINC00346Q8IVM7 164 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 ADGRG5Q8IZF4 528 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 CYB561A3Q8NBI2 242 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 OR2T33Q8NG76 320 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 OR8D4Q8NGM9 314 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 OR2T4Q8NH00 348 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 APOBEC3DQ96AK3 386 aaPredicted RBP12.83□□□□□ -0.36
USP39-217ENST00000491659 CMBLQ96DG6 245 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 C1orf159Q96HA4 380 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 PITX2Q99697 317 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 CHID1Q9BWS9 393 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 TSSK6Q9BXA6 273 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 MSL2Q9HCI7 577 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 KCNG2Q9UJ96 466 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 KLHL21Q9UJP4 597 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 PURGQ9UJV8 347 aaKnown RBP12.83□□□□□ -0.36
USP39-217ENST00000491659 STARD10Q9Y365 291 aa12.83□□□□□ -0.36
USP39-217ENST00000491659 B4DSR2 109 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 GNGT2O14610 69 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 IFNGP01579 166 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 CD55P08174 381 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 SRD5A1P18405 259 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 KITLGP21583 273 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 PYCR1P32322 319 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 DVL1P1P54792 670 aaPredicted RBP12.82□□□□□ -0.36
USP39-217ENST00000491659 TNFAIP6P98066 277 aaPredicted RBP12.82□□□□□ -0.36
USP39-217ENST00000491659 MVKQ03426 396 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 SLC3A1Q07837 685 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 DBPQ10586 325 aaPredicted RBP12.82□□□□□ -0.36
USP39-217ENST00000491659 ECH1Q13011 328 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 CR1LQ2VPA4 569 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 AVPI1Q5T686 147 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 CFAP77Q6ZQR2 320 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 IL17RELQ6ZVW7 336 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 GLCCI1Q86VQ1 547 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 LNX2Q8N448 690 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 SLC37A3Q8NCC5 494 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 TEX47Q8TBZ9 253 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 GIPC3Q8TF64 312 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 PTP4A1Q93096 173 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 ATF6BQ99941 703 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 ARMC1Q9NVT9 282 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 PTTG3PQ9NZH4 202 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 CYB5R1Q9UHQ9 305 aa12.82□□□□□ -0.36
USP39-217ENST00000491659 ARRDC5A6NEK1 342 aa12.81□□□□□ -0.36
USP39-217ENST00000491659 WNT9BO14905 357 aa12.81□□□□□ -0.36
USP39-217ENST00000491659 RAC2P15153 192 aa12.81□□□□□ -0.36
USP39-217ENST00000491659 ZNF3P17036 446 aa12.81□□□□□ -0.36
USP39-217ENST00000491659 CDK5R2Q13319 367 aa12.81□□□□□ -0.36
USP39-217ENST00000491659 SPATA24Q86W54 205 aa12.81□□□□□ -0.36
USP39-217ENST00000491659 OR2Z1Q8NG97 314 aa12.81□□□□□ -0.36
USP39-217ENST00000491659 OR9Q1Q8NGQ5 310 aa12.81□□□□□ -0.36
USP39-217ENST00000491659 CANT1Q8WVQ1 401 aa12.81□□□□□ -0.36
USP39-217ENST00000491659 CCL17Q92583 94 aa12.81□□□□□ -0.36
USP39-217ENST00000491659 RAB1CQ92928 201 aa12.81□□□□□ -0.36
USP39-217ENST00000491659 HAVCR1Q96D42 359 aa12.81□□□□□ -0.36
USP39-217ENST00000491659 RAB39BQ96DA2 213 aa12.81□□□□□ -0.36
USP39-217ENST00000491659 YY1AP1Q9H869 796 aa12.81□□□□□ -0.36
USP39-217ENST00000491659 MRPL22Q9NWU5 206 aaKnown RBP12.81□□□□□ -0.36
USP39-217ENST00000491659 TREM2Q9NZC2 230 aa12.81□□□□□ -0.36
USP39-217ENST00000491659 WIPI2Q9Y4P8 454 aa12.81□□□□□ -0.36
USP39-217ENST00000491659 CACNG2Q9Y698 323 aa12.81□□□□□ -0.36
USP39-217ENST00000491659 ERICH4A6NGS2 130 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms