RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ZNF665Q9H7R5 613 aa26.61■■□□□ 1.85
LDB1-204ENST00000490751 CDH10Q9Y6N8 788 aa26.61■■□□□ 1.85
LDB1-204ENST00000490751 OR6C68A6NDL8 312 aa26.6■■□□□ 1.85
LDB1-204ENST00000490751 UBOX5O94941 541 aa26.6■■□□□ 1.85
LDB1-204ENST00000490751 KITLGP21583 273 aa26.6■■□□□ 1.85
LDB1-204ENST00000490751 TRIM25Q14258 630 aaKnown RBP26.6■■□□□ 1.85
LDB1-204ENST00000490751 ZBTB46Q86UZ6 589 aa26.6■■□□□ 1.85
LDB1-204ENST00000490751 LINC00471Q8N535 108 aa26.6■■□□□ 1.85
LDB1-204ENST00000490751 OR52L1Q8NGH7 329 aa26.6■■□□□ 1.85
LDB1-204ENST00000490751 OR52E2Q8NGJ4 325 aa26.6■■□□□ 1.85
LDB1-204ENST00000490751 RAB1CQ92928 201 aa26.6■■□□□ 1.85
LDB1-204ENST00000490751 TMEM186Q96B77 213 aa26.6■■□□□ 1.85
LDB1-204ENST00000490751 COQ7Q99807 217 aa26.6■■□□□ 1.85
LDB1-204ENST00000490751 MAGIXQ9H6Y5 334 aa26.6■■□□□ 1.85
LDB1-204ENST00000490751 HIF1ANQ9NWT6 349 aa26.6■■□□□ 1.85
LDB1-204ENST00000490751 DYNC1I1O14576 645 aa26.59■■□□□ 1.85
LDB1-204ENST00000490751 T-ENOLP0DO92 83 aa26.59■■□□□ 1.85
LDB1-204ENST00000490751 SRP14P37108 136 aaKnown RBP26.59■■□□□ 1.85
LDB1-204ENST00000490751 RGS6P49758 472 aa26.59■■□□□ 1.85
LDB1-204ENST00000490751 TNFAIP6P98066 277 aaPredicted RBP26.59■■□□□ 1.85
LDB1-204ENST00000490751 MS4A2Q01362 244 aa26.59■■□□□ 1.85
LDB1-204ENST00000490751 KHDRBS1Q07666 443 aaKnown RBP eCLIP26.59■■□□□ 1.85
LDB1-204ENST00000490751 COX10Q12887 443 aa26.59■■□□□ 1.85
LDB1-204ENST00000490751 PPP1R8Q12972 351 aaKnown RBP26.59■■□□□ 1.85
LDB1-204ENST00000490751 CDK5R2Q13319 367 aa26.59■■□□□ 1.85
LDB1-204ENST00000490751 RPL13AP3Q6NVV1 102 aa26.59■■□□□ 1.85
LDB1-204ENST00000490751 PHC2Q8IXK0 858 aa26.59■■□□□ 1.85
LDB1-204ENST00000490751 OR51F2Q8NH61 342 aa26.59■■□□□ 1.85
LDB1-204ENST00000490751 J3QW42 95 aa26.58■■□□□ 1.85
LDB1-204ENST00000490751 CCNB2O95067 398 aa26.58■■□□□ 1.85
LDB1-204ENST00000490751 ERFP50548 548 aa26.58■■□□□ 1.85
LDB1-204ENST00000490751 ZNF770Q6IQ21 691 aaPredicted RBP26.58■■□□□ 1.85
LDB1-204ENST00000490751 Q6ZR03 302 aa26.58■■□□□ 1.85
LDB1-204ENST00000490751 LINC00346Q8IVM7 164 aa26.58■■□□□ 1.85
LDB1-204ENST00000490751 PTP4A1Q93096 173 aa26.58■■□□□ 1.85
LDB1-204ENST00000490751 HAVCR1Q96D42 359 aa26.58■■□□□ 1.85
LDB1-204ENST00000490751 RAB39BQ96DA2 213 aa26.58■■□□□ 1.85
LDB1-204ENST00000490751 PTTG3PQ9NZH4 202 aa26.58■■□□□ 1.85
LDB1-204ENST00000490751 GASTP01350 101 aa26.57■■□□□ 1.84
LDB1-204ENST00000490751 SLC3A1Q07837 685 aa26.57■■□□□ 1.84
LDB1-204ENST00000490751 SLC36A3Q495N2 470 aa26.57■■□□□ 1.84
LDB1-204ENST00000490751 SLC18B1Q6NT16 456 aa26.57■■□□□ 1.84
LDB1-204ENST00000490751 OR2Z1Q8NG97 314 aa26.57■■□□□ 1.84
LDB1-204ENST00000490751 PLA2G12AQ9BZM1 189 aa26.57■■□□□ 1.84
LDB1-204ENST00000490751 VNN3Q9NY84 501 aa26.57■■□□□ 1.84
LDB1-204ENST00000490751 PRPF19Q9UMS4 504 aaKnown RBP26.57■■□□□ 1.84
LDB1-204ENST00000490751 BHLHE40O14503 412 aa26.56■■□□□ 1.84
LDB1-204ENST00000490751 HLA-DQA2P01906 255 aa26.56■■□□□ 1.84
LDB1-204ENST00000490751 RAC2P15153 192 aa26.56■■□□□ 1.84
LDB1-204ENST00000490751 CFAP77Q6ZQR2 320 aa26.56■■□□□ 1.84
LDB1-204ENST00000490751 OR5L1Q8NGL2 311 aa26.56■■□□□ 1.84
LDB1-204ENST00000490751 OR8D4Q8NGM9 314 aa26.56■■□□□ 1.84
LDB1-204ENST00000490751 APOBEC3DQ96AK3 386 aaPredicted RBP26.56■■□□□ 1.84
LDB1-204ENST00000490751 IL20Q9NYY1 176 aa26.56■■□□□ 1.84
LDB1-204ENST00000490751 DYSFO75923 2080 aa26.55■■□□□ 1.84
LDB1-204ENST00000490751 DEAF1O75398 565 aaPredicted RBP26.55■■□□□ 1.84
LDB1-204ENST00000490751 IGHV2-5P01817 119 aa26.55■■□□□ 1.84
LDB1-204ENST00000490751 TNFSF4P23510 183 aa26.55■■□□□ 1.84
LDB1-204ENST00000490751 HNRNPA0Q13151 305 aaKnown RBP26.55■■□□□ 1.84
LDB1-204ENST00000490751 HLXQ14774 488 aaPredicted RBP26.55■■□□□ 1.84
LDB1-204ENST00000490751 FAM98BQ52LJ0 330 aaKnown RBP26.55■■□□□ 1.84
LDB1-204ENST00000490751 OR2T5Q6IEZ7 315 aa26.55■■□□□ 1.84
LDB1-204ENST00000490751 ACSM5Q6NUN0 579 aa26.55■■□□□ 1.84
LDB1-204ENST00000490751 RASSF6Q6ZTQ3 369 aa26.55■■□□□ 1.84
LDB1-204ENST00000490751 AQP11Q8NBQ7 271 aa26.55■■□□□ 1.84
LDB1-204ENST00000490751 OR2T29Q8NH02 315 aa26.55■■□□□ 1.84
LDB1-204ENST00000490751 CCDC124Q96CT7 223 aaKnown RBP26.55■■□□□ 1.84
LDB1-204ENST00000490751 PITX2Q99697 317 aa26.55■■□□□ 1.84
LDB1-204ENST00000490751 CDADC1Q9BWV3 514 aa26.55■■□□□ 1.84
LDB1-204ENST00000490751 REEP1Q9H902 201 aa26.55■■□□□ 1.84
LDB1-204ENST00000490751 SAMHD1Q9Y3Z3 626 aaKnown RBP26.55■■□□□ 1.84
LDB1-204ENST00000490751 U3KQV3 271 aa26.55■■□□□ 1.84
LDB1-204ENST00000490751 TRAV20A0A0B4J274 112 aa26.54■■□□□ 1.84
LDB1-204ENST00000490751 ANPEPP15144 967 aa26.54■■□□□ 1.84
LDB1-204ENST00000490751 FBXW12Q6X9E4 464 aa26.54■■□□□ 1.84
LDB1-204ENST00000490751 OR5AS1Q8N127 324 aa26.54■■□□□ 1.84
LDB1-204ENST00000490751 CYB561A3Q8NBI2 242 aa26.54■■□□□ 1.84
LDB1-204ENST00000490751 OR2AJ1Q8NGZ0 328 aa26.54■■□□□ 1.84
LDB1-204ENST00000490751 ASB9Q96DX5 294 aa26.54■■□□□ 1.84
LDB1-204ENST00000490751 CLPTM1LQ96KA5 538 aa26.54■■□□□ 1.84
LDB1-204ENST00000490751 GAL3ST1Q99999 423 aa26.54■■□□□ 1.84
LDB1-204ENST00000490751 TBC1D23Q9NUY8 699 aa26.54■■□□□ 1.84
LDB1-204ENST00000490751 MRPL22Q9NWU5 206 aaKnown RBP26.54■■□□□ 1.84
LDB1-204ENST00000490751 DCAF16Q9NXF7 216 aa26.54■■□□□ 1.84
LDB1-204ENST00000490751 TAS2R1Q9NYW7 299 aa26.54■■□□□ 1.84
LDB1-204ENST00000490751 CYB5R1Q9UHQ9 305 aa26.54■■□□□ 1.84
LDB1-204ENST00000490751 ISPDA4D126 451 aa26.53■■□□□ 1.84
LDB1-204ENST00000490751 PYCR1P32322 319 aa26.53■■□□□ 1.84
LDB1-204ENST00000490751 GGT2P36268 569 aa26.53■■□□□ 1.84
LDB1-204ENST00000490751 SRSF2Q01130 221 aaKnown RBP26.53■■□□□ 1.84
LDB1-204ENST00000490751 RSPO1Q2MKA7 263 aaPredicted RBP26.53■■□□□ 1.84
LDB1-204ENST00000490751 KRTAP24-1Q3LI83 254 aa26.53■■□□□ 1.84
LDB1-204ENST00000490751 PEG10Q86TG7 708 aaKnown RBP26.53■■□□□ 1.84
LDB1-204ENST00000490751 DDOQ99489 341 aa26.53■■□□□ 1.84
LDB1-204ENST00000490751 TNFRSF1AP19438 455 aa26.52■■□□□ 1.84
LDB1-204ENST00000490751 OR2T2Q6IF00 324 aa26.52■■□□□ 1.84
LDB1-204ENST00000490751 ZNF771Q7L3S4 317 aaPredicted RBP26.52■■□□□ 1.84
LDB1-204ENST00000490751 PROKR2Q8NFJ6 384 aa26.52■■□□□ 1.84
LDB1-204ENST00000490751 ITLN1Q8WWA0 313 aa26.52■■□□□ 1.84
LDB1-204ENST00000490751 POP5Q969H6 163 aaKnown RBP26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms