RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 LUZP2Q86TE4 346 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 ARRDC1Q8N5I2 433 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 NPWQ8N729 165 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 ZNF615Q8N8J6 731 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 CHST4Q8NCG5 386 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 OR52E2Q8NGJ4 325 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 OR5K2Q8NHB8 316 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 APH1BQ8WW43 257 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 NRGNQ92686 78 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 FLYWCH2Q96CP2 140 aaKnown RBP2.22□□□□□ -2.05
CD46-216ENST00000490278 NEURL3Q96EH8 262 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 RNF157Q96PX1 679 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 XPO6Q96QU8 1125 aaKnown RBP2.22□□□□□ -2.05
CD46-216ENST00000490278 SCRT1Q9BWW7 348 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 ANKRD60Q9BZ19 345 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 EDA2RQ9HAV5 297 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 RETNQ9HD89 108 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 ZDHHC4Q9NPG8 344 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 DUX4Q9UBX2 424 aa2.22□□□□□ -2.05
CD46-216ENST00000490278 DOCK9Q9BZ29 2069 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 TRAV40A0A0B4J280 105 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 IGHV1OR15-9A0A0B4J2B8 117 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 SERPINE3A8MV23 424 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 H7C0C1 242 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 K7EMT4 169 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 BPY2O14599 106 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 DNALI1O14645 258 aaPredicted RBP2.21□□□□□ -2.06
CD46-216ENST00000490278 CDC40O60508 579 aaKnown RBP eCLIP2.21□□□□□ -2.06
CD46-216ENST00000490278 RBBP9O75884 186 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 FLOT1O75955 427 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 MPZL1O95297 269 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 FGFR1OPO95684 399 aaKnown RBP2.21□□□□□ -2.06
CD46-216ENST00000490278 CTSLP07711 333 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 C1GALT1C1LP0DN25 315 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 STOMP27105 288 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 OR1E1P30953 314 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 UQCRFS1P47985 274 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 ATP5OP48047 213 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 CDKN2DP55273 166 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 IFT88Q13099 833 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 TCEAL5Q5H9L2 206 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 MBOAT2Q6ZWT7 520 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 BZW1Q7L1Q6 419 aaKnown RBP2.21□□□□□ -2.06
CD46-216ENST00000490278 SNX20Q7Z614 316 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 HMGN2P46Q86SG4 172 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 CDKL3Q8IVW4 592 aaPredicted RBP2.21□□□□□ -2.06
CD46-216ENST00000490278 GABRG1Q8N1C3 465 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 CBR4Q8N4T8 237 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 RNF182Q8N6D2 247 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 COX18Q8N8Q8 333 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 OR4K5Q8NGD3 323 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 TSEN15Q8WW01 171 aaKnown RBP2.21□□□□□ -2.06
CD46-216ENST00000490278 ESR2Q92731 530 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 TCEAL3Q969E4 200 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 PTX4Q96A99 478 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 DCPSQ96C86 337 aaKnown RBP2.21□□□□□ -2.06
CD46-216ENST00000490278 C8orf44Q96CB5 159 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 L3HYPDHQ96EM0 354 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 COL21A1Q96P44 957 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 GSDMAQ96QA5 445 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 HSD17B10Q99714 261 aaKnown RBP2.21□□□□□ -2.06
CD46-216ENST00000490278 PTTG3PQ9NZH4 202 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 GCNT4Q9P109 453 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 TSSC4Q9Y5U2 329 aaPredicted RBP2.21□□□□□ -2.06
CD46-216ENST00000490278 CABIN1Q9Y6J0 2220 aa2.21□□□□□ -2.06
CD46-216ENST00000490278 COL22A1Q8NFW1 1626 aaPredicted RBP2.2□□□□□ -2.06
CD46-216ENST00000490278 PCM1Q15154 2024 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 TNS2Q63HR2 1409 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 IGLV2-18A0A075B6J9 118 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 NCBP2LA6PVI3 153 aaKnown RBP2.2□□□□□ -2.06
CD46-216ENST00000490278 H7C417 338 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 DNASE2O00115 360 aaPredicted RBP2.2□□□□□ -2.06
CD46-216ENST00000490278 SOCS1O15524 211 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 CCNKO75909 580 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 SEMA3DO95025 777 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 RCBTB2O95199 551 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 HLA-DQA1P01909 254 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 POLR2MP0CAP2 368 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 OPRK1P41145 380 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 SLC11A1P49279 550 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 PRRX1P54821 245 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 SYNJ2BPP57105 145 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 SEMG2Q02383 582 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 KIR2DS1Q14954 304 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 SAXO2Q658L1 398 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 IGFL1Q6UW32 110 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 SPESP1Q6UW49 350 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 EIF3MQ7L2H7 374 aaKnown RBP2.2□□□□□ -2.06
CD46-216ENST00000490278 SSX9Q7RTT3 188 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 WDFY1Q8IWB7 410 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 FAM71AQ8IYT1 594 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 TTC29Q8NA56 475 aaPredicted RBP2.2□□□□□ -2.06
CD46-216ENST00000490278 C11orf72Q8NBR9 251 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 OR11H7Q8NGC8 314 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 OR9G4Q8NGQ1 327 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 PRRC1Q96M27 445 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 ZYG11BQ9C0D3 744 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 ACTR3CQ9C0K3 210 aaPredicted RBP2.2□□□□□ -2.06
CD46-216ENST00000490278 OR52D1Q9H346 318 aa2.2□□□□□ -2.06
CD46-216ENST00000490278 WFDC1Q9HC57 220 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms