RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 SPATC1Q76KD6 591 aa13.27□□□□□ -0.29
PLOD3-216ENST00000489927 FAM122BQ7Z309 247 aa13.27□□□□□ -0.29
PLOD3-216ENST00000489927 RNF113BQ8IZP6 322 aaKnown RBP13.27□□□□□ -0.29
PLOD3-216ENST00000489927 POU5F2Q8N7G0 328 aa13.27□□□□□ -0.29
PLOD3-216ENST00000489927 PCYOX1LQ8NBM8 494 aa13.27□□□□□ -0.29
PLOD3-216ENST00000489927 FAM156AQ8NDB6 213 aa13.27□□□□□ -0.29
PLOD3-216ENST00000489927 OR8G5Q8NG78 346 aa13.27□□□□□ -0.29
PLOD3-216ENST00000489927 OR13G1Q8NGZ3 307 aa13.27□□□□□ -0.29
PLOD3-216ENST00000489927 ACOT11Q8WXI4 607 aaPredicted RBP13.27□□□□□ -0.29
PLOD3-216ENST00000489927 LZICQ8WZA0 190 aa13.27□□□□□ -0.29
PLOD3-216ENST00000489927 TMIGD2Q96BF3 282 aa13.27□□□□□ -0.29
PLOD3-216ENST00000489927 ZNF570Q96NI8 536 aa13.27□□□□□ -0.29
PLOD3-216ENST00000489927 TMEM246Q9BRR3 403 aa13.27□□□□□ -0.29
PLOD3-216ENST00000489927 RERGLQ9H628 205 aa13.27□□□□□ -0.29
PLOD3-216ENST00000489927 MIOXQ9UGB7 285 aa13.27□□□□□ -0.29
PLOD3-216ENST00000489927 COA3Q9Y2R0 106 aaPredicted RBP13.27□□□□□ -0.29
PLOD3-216ENST00000489927 VWFP04275 2813 aa13.26□□□□□ -0.29
PLOD3-216ENST00000489927 LOC100653049A0A140TA62 436 aa13.26□□□□□ -0.29
PLOD3-216ENST00000489927 ELOVL7A1L3X0 281 aa13.26□□□□□ -0.29
PLOD3-216ENST00000489927 BBIP1A8MTZ0 92 aa13.26□□□□□ -0.29
PLOD3-216ENST00000489927 J3QW42 95 aa13.26□□□□□ -0.29
PLOD3-216ENST00000489927 IMPA2O14732 288 aa13.26□□□□□ -0.29
PLOD3-216ENST00000489927 RER1O15258 196 aa13.26□□□□□ -0.29
PLOD3-216ENST00000489927 MLNRO43193 412 aa13.26□□□□□ -0.29
PLOD3-216ENST00000489927 HOXA3O43365 443 aaPredicted RBP13.26□□□□□ -0.29
PLOD3-216ENST00000489927 SLC16A7O60669 478 aa13.26□□□□□ -0.29
PLOD3-216ENST00000489927 KRT34O76011 436 aa13.26□□□□□ -0.29
PLOD3-216ENST00000489927 SRP9P49458 86 aaKnown RBP13.26□□□□□ -0.29
PLOD3-216ENST00000489927 LSM6P62312 80 aaKnown RBP13.26□□□□□ -0.29
PLOD3-216ENST00000489927 ZBED5Q49AG3 693 aa13.26□□□□□ -0.29
PLOD3-216ENST00000489927 FAM201AQ5SY85 155 aa13.26□□□□□ -0.29
PLOD3-216ENST00000489927 BRD3OSQ6XYD6 125 aa13.26□□□□□ -0.29
PLOD3-216ENST00000489927 TMPRSS11FQ6ZWK6 438 aa13.26□□□□□ -0.29
PLOD3-216ENST00000489927 MOGAT3Q86VF5 341 aa13.26□□□□□ -0.29
PLOD3-216ENST00000489927 GLB1L2Q8IW92 636 aa13.26□□□□□ -0.29
PLOD3-216ENST00000489927 RASD2Q96D21 266 aa13.26□□□□□ -0.29
PLOD3-216ENST00000489927 NEIL1Q96FI4 390 aaPredicted RBP13.26□□□□□ -0.29
PLOD3-216ENST00000489927 ZNF582Q96NG8 517 aaPredicted RBP13.26□□□□□ -0.29
PLOD3-216ENST00000489927 SYT4Q9H2B2 425 aa13.26□□□□□ -0.29
PLOD3-216ENST00000489927 GMPR2Q9P2T1 348 aaKnown RBP13.26□□□□□ -0.29
PLOD3-216ENST00000489927 KIR2DS1A0A191URI9 304 aa13.25□□□□□ -0.29
PLOD3-216ENST00000489927 HMGB1P1B2RPK0 211 aaPredicted RBP13.25□□□□□ -0.29
PLOD3-216ENST00000489927 F5H5P2 479 aa13.25□□□□□ -0.29
PLOD3-216ENST00000489927 SELEP16581 610 aa13.25□□□□□ -0.29
PLOD3-216ENST00000489927 RGS6P49758 472 aa13.25□□□□□ -0.29
PLOD3-216ENST00000489927 KRR1Q13601 381 aaKnown RBP13.25□□□□□ -0.29
PLOD3-216ENST00000489927 DEFB112Q30KQ8 113 aa13.25□□□□□ -0.29
PLOD3-216ENST00000489927 ZNF404Q494X3 552 aa13.25□□□□□ -0.29
PLOD3-216ENST00000489927 MIDNQ504T8 468 aa13.25□□□□□ -0.29
PLOD3-216ENST00000489927 BHLHE23Q8NDY6 225 aa13.25□□□□□ -0.29
PLOD3-216ENST00000489927 OR5L1Q8NGL2 311 aa13.25□□□□□ -0.29
PLOD3-216ENST00000489927 OR10S1Q8NGN2 331 aa13.25□□□□□ -0.29
PLOD3-216ENST00000489927 PLEKHA8Q96JA3 519 aa13.25□□□□□ -0.29
PLOD3-216ENST00000489927 SLC30A2Q9BRI3 323 aa13.25□□□□□ -0.29
PLOD3-216ENST00000489927 NMNAT1Q9HAN9 279 aaPredicted RBP13.25□□□□□ -0.29
PLOD3-216ENST00000489927 SAR1AQ9NR31 198 aa13.25□□□□□ -0.29
PLOD3-216ENST00000489927 GID8Q9NWU2 228 aa13.25□□□□□ -0.29
PLOD3-216ENST00000489927 FAM181BA6NEQ2 426 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 LRRC30A6NM36 301 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 KHDRBS3O75525 346 aaKnown RBP13.24□□□□□ -0.29
PLOD3-216ENST00000489927 FSTL3O95633 263 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 ZNF682O95780 498 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 SDHAP31040 664 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 PMELP40967 661 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 PITPNBP48739 271 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 SRSF4Q08170 494 aaKnown RBP13.24□□□□□ -0.29
PLOD3-216ENST00000489927 MAPRE2Q15555 327 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 ZNF181Q2M3W8 571 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 NLRC3Q7RTR2 1065 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 FITM2Q8N6M3 262 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 OR8B3Q8NGG8 313 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 APOBEC3DQ96AK3 386 aaPredicted RBP13.24□□□□□ -0.29
PLOD3-216ENST00000489927 FAM46AQ96IP4 442 aaKnown RBP13.24□□□□□ -0.29
PLOD3-216ENST00000489927 OR8B2Q96RD0 313 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 NUDT16L1Q9BRJ7 211 aaKnown RBP13.24□□□□□ -0.29
PLOD3-216ENST00000489927 NUAK2Q9H093 628 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 PRDM13Q9H4Q3 707 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 WDR76Q9H967 626 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 NRIP3Q9NQ35 241 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 MRGBPQ9NV56 204 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 VSX1Q9NZR4 365 aaPredicted RBP13.24□□□□□ -0.29
PLOD3-216ENST00000489927 ATPIF1Q9UII2 106 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 MMP24Q9Y5R2 645 aa13.24□□□□□ -0.29
PLOD3-216ENST00000489927 IQCF6A8MYZ5 107 aa13.23□□□□□ -0.29
PLOD3-216ENST00000489927 SRRM5B3KS81 715 aa13.23□□□□□ -0.29
PLOD3-216ENST00000489927 PTP4A3O75365 173 aa13.23□□□□□ -0.29
PLOD3-216ENST00000489927 HLA-DPB1P04440 258 aa13.23□□□□□ -0.29
PLOD3-216ENST00000489927 SF3A3Q12874 501 aaKnown RBP eCLIP13.23□□□□□ -0.29
PLOD3-216ENST00000489927 MEP1BQ16820 701 aa13.23□□□□□ -0.29
PLOD3-216ENST00000489927 IFI44LQ53G44 452 aa13.23□□□□□ -0.29
PLOD3-216ENST00000489927 LYPD2Q6UXB3 125 aa13.23□□□□□ -0.29
PLOD3-216ENST00000489927 PTCHD4Q6ZW05 846 aa13.23□□□□□ -0.29
PLOD3-216ENST00000489927 RRM2BQ7LG56 351 aa13.23□□□□□ -0.29
PLOD3-216ENST00000489927 SLC7A13Q8TCU3 470 aa13.23□□□□□ -0.29
PLOD3-216ENST00000489927 WFDC12Q8WWY7 111 aa13.23□□□□□ -0.29
PLOD3-216ENST00000489927 ZDHHC16Q969W1 377 aa13.23□□□□□ -0.29
PLOD3-216ENST00000489927 CDADC1Q9BWV3 514 aa13.23□□□□□ -0.29
PLOD3-216ENST00000489927 NDEL1Q9GZM8 345 aa13.23□□□□□ -0.29
PLOD3-216ENST00000489927 TNFRSF19Q9NS68 423 aa13.23□□□□□ -0.29
PLOD3-216ENST00000489927 CMTM6Q9NX76 183 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms