RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 ACOD1A6NK06 481 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 TMEM212A6NML5 194 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 OR4C45A6NMZ5 311 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 SGCEO43556 437 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 SC5DO75845 299 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 ATE1O95260 518 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 PSMA6P60900 246 aaKnown RBP12.39□□□□□ -0.43
VPS26A-205ENST00000489656 TGFBR3Q03167 851 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 SLC3A1Q07837 685 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 KRTAP27-1Q3LI81 207 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 SLC36A2Q495M3 483 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 MYO7BQ6PIF6 2116 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 SPATC1Q76KD6 591 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 GABRG1Q8N1C3 465 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 PRSS35Q8N3Z0 413 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 IL17RDQ8NFM7 739 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 HSD17B8Q92506 261 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 GHSRQ92847 366 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 KCNJ15Q99712 375 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 ATF6BQ99941 703 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 CHCHD6Q9BRQ6 235 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 MOB1AQ9H8S9 216 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 FBXL3Q9UKT7 428 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 ZNF281Q9Y2X9 895 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 PCNX1Q96RV3 2341 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 LOC100506127A0A0U1RQW1 187 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 OR6C6A6NF89 314 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 E9PLN8 166 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 GABRPO00591 440 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 LRRTM2O43300 516 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 SYNGR3O43761 229 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 RGS9O75916 674 aaPredicted RBP12.38□□□□□ -0.43
VPS26A-205ENST00000489656 ZFPL1O95159 310 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 PNPP00491 289 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 SERPINA3P01011 423 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 APOC1P02654 83 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 NR4A1P22736 598 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 IGHV1-2P23083 117 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 HSD11B1P28845 292 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 OPRM1P35372 400 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 UGT2B10P36537 528 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 KIR3DL2P43630 455 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 NCS1P62166 190 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 PSG4Q00888 419 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 FABP5Q01469 135 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 P2RY6Q15077 328 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 TAF13Q15543 124 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 YIF1BQ5BJH7 314 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 WDR38Q5JTN6 314 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 TMEM91Q6ZNR0 172 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 BEND4Q6ZU67 534 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 CCDC36Q8IYA8 594 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 ZNF433Q8N7K0 673 aaPredicted RBP12.38□□□□□ -0.43
VPS26A-205ENST00000489656 FGFBP3Q8TAT2 258 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 TRMT61AQ96FX7 289 aaKnown RBP12.38□□□□□ -0.43
VPS26A-205ENST00000489656 VKORC1Q9BQB6 163 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 CENPOQ9BU64 300 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 TMED9Q9BVK6 235 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 OR2H1Q9GZK4 316 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 WNT5BQ9H1J7 359 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 G6PC2Q9NQR9 355 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 TXNL4BQ9NX01 149 aaKnown RBP12.38□□□□□ -0.43
VPS26A-205ENST00000489656 FAM206AQ9NX38 181 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 PLEK2Q9NYT0 353 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 PTTG2Q9NZH5 202 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 TINAGQ9UJW2 476 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 SLC5A6Q9Y289 635 aa12.38□□□□□ -0.43
VPS26A-205ENST00000489656 TMEM269A0A1B0GVZ9 245 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 LOC110117498-PIK3R3F6TDL0 507 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 DOK2O60496 412 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 GATBO75879 557 aaKnown RBP12.37□□□□□ -0.43
VPS26A-205ENST00000489656 UBL3O95164 117 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 COX5BP10606 129 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 CRYGSP22914 178 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 ARR3P36575 388 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 CA7P43166 264 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 VBP1P61758 197 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 RPS11P62280 158 aaKnown RBP eCLIP12.37□□□□□ -0.43
VPS26A-205ENST00000489656 LSM3P62310 102 aaKnown RBP12.37□□□□□ -0.43
VPS26A-205ENST00000489656 MFGE8Q08431 387 aaPredicted RBP12.37□□□□□ -0.43
VPS26A-205ENST00000489656 NFATC3Q12968 1075 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 SPCS2Q15005 226 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 RSPO1Q2MKA7 263 aaPredicted RBP12.37□□□□□ -0.43
VPS26A-205ENST00000489656 C9orf135Q5VTT2 229 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 TMEM211Q6ICI0 200 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 TMEM53Q6P2H8 277 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 PAMR1Q6UXH9 720 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 UNQ9370/PRO34162Q6UXP9 181 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 C3P1Q6ZMU1 363 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 USP43Q70EL4 1123 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 ZNF610Q8N9Z0 462 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 KBTBD8Q8NFY9 601 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 OR5AK2Q8NH90 309 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 OR1F12Q8NHA8 337 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 ABHD4Q8TB40 342 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 NANOS1Q8WY41 292 aaKnown RBP12.37□□□□□ -0.43
VPS26A-205ENST00000489656 PHYHIPQ92561 330 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 THRSPQ92748 146 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 TMEM203Q969S6 136 aa12.37□□□□□ -0.43
VPS26A-205ENST00000489656 DMRTA2Q96SC8 542 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms