RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 HTR1AP08908 422 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 PAICSP22234 425 aaKnown RBP9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 APOBEC3AP31941 199 aaPredicted RBP9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 ARF1P84077 181 aaKnown RBP9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 EMX1Q04741 257 aaPredicted RBP9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 LSAMPQ13449 338 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 TBCEQ15813 527 aaPredicted RBP9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 CEACAM16Q2WEN9 425 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 KRTAP21-3Q3LHN1 58 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 SLC35D3Q5M8T2 416 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 SYT6Q5T7P8 510 aaPredicted RBP9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 RNLSQ5VYX0 342 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 OTPQ5XKR4 325 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 C11orf71Q6IPW1 123 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 ZNF627Q7L945 461 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 ANKRD13BQ86YJ7 626 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 GID4Q8IVV7 300 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 TIGD4Q8IY51 512 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 ZNF511Q8NB15 262 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 SLC26A10Q8NG04 563 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 OR6N1Q8NGY5 312 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 OR2T4Q8NH00 348 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 HTRA1Q92743 480 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 GGHQ92820 318 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 RFKQ969G6 155 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 ISOC1Q96CN7 298 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 LGALS12Q96DT0 336 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 ZMYND19Q96E35 227 aaPredicted RBP9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 POM121Q96HA1 1249 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 FOXN4Q96NZ1 517 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 ZNF649Q9BS31 505 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 CACNG6Q9BXT2 260 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 NELFAQ9H3P2 528 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 ADGRL4Q9HBW9 690 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 CRLF2Q9HC73 371 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 CHCHD3Q9NX63 227 aaKnown RBP9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 HAO2Q9NYQ3 351 aa9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 CRNNQ9UBG3 495 aaPredicted RBP9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 EXOGQ9Y2C4 368 aaKnown RBP9.16□□□□□ -0.94
SCAMP4-208ENST00000489554 A0A096LPE4 126 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 IGHV1-18A0A0C4DH31 117 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 A0A1W2PPZ6 126 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 VGLL3A8MV65 326 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 ATP6V1G2-DDX39BF2Z307 99 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 KHDRBS3O75525 346 aaKnown RBP9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 MPZL1O95297 269 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 LY6G6DO95868 133 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 IGKV3-15P01624 115 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 IGLV1-44P01699 117 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 IGHV4-39P01824 125 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 HOXB4P17483 251 aaPredicted RBP9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 CRABP1P29762 137 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 CDAP32320 146 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 TNK1Q13470 666 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 DOC2BQ14184 412 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 KCNMB1Q16558 191 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 MEP1BQ16820 701 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 PCK2Q16822 640 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 TIMM50Q3ZCQ8 353 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 KLHL12Q53G59 568 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 UBE2UQ5VVX9 321 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 GPR107Q5VW38 600 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 XAF1Q6GPH4 301 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 LINC00299Q6ZSB3 139 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 AHSA2Q719I0 299 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 PROKR2Q8NFJ6 384 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 FNDC8Q8TC99 324 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 NSMAFQ92636 917 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 TMIGD2Q96BF3 282 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 OTULINQ96BN8 352 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 RBP7Q96R05 134 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 CDCA4Q9BXL8 241 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 ULBP2Q9BZM5 246 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 WDR76Q9H967 626 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 H2AFY2Q9P0M6 372 aaPredicted RBP9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 ERVK-18Q9QC07 812 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 MOKQ9UQ07 419 aa9.15□□□□□ -0.94
SCAMP4-208ENST00000489554 NF1P21359 2839 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 TVP23AA6NH52 213 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 SLC22A31A6NKX4 558 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 PRR32B1ATL7 298 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 H7C417 338 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 SLC22A1O15245 554 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 SELENOFO60613 162 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 APOL3O95236 402 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 IGHA1P01876 353 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 SBK2P0C263 348 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 CECR9P0C854 216 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 CBR1P16152 277 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 PCMT1P22061 227 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 LAP3P28838 519 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 ARR3P36575 388 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 MTNR1AP48039 350 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 SERPINB10P48595 397 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 DSCR9P59020 149 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 TUBA1BP68363 451 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 MRPS34P82930 218 aaKnown RBP9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 NAAAQ02083 359 aa9.14□□□□□ -0.95
SCAMP4-208ENST00000489554 HSF2Q03933 536 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms