RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 CREB3L2Q70SY1 520 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 SSX6Q7RTT6 188 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 DCXRQ7Z4W1 244 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 MDGA2Q7Z553 956 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 CATSPERDQ86XM0 798 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 DTX1Q86Y01 620 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 SERPINA12Q8IW75 414 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 GPR137CQ8N3F9 429 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 GALNT16Q8N428 558 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 FAM83FQ8NEG4 500 aaPredicted RBP5.65□□□□□ -1.5
SF3A3-208ENST00000489537 OR9K2Q8NGE7 335 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 OR52H1Q8NGJ2 320 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 TRMT10AQ8TBZ6 339 aaKnown RBP5.65□□□□□ -1.5
SF3A3-208ENST00000489537 CPT1CQ8TCG5 803 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 ZPLD1Q8TCW7 415 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 ST7LQ8TDW4 575 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 CHAC2Q8WUX2 184 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 TMEM54Q969K7 222 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 MCHR2Q969V1 340 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 SPTSSAQ969W0 71 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 RFT1Q96AA3 541 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 ZC3HAV1LQ96H79 300 aaKnown RBP5.65□□□□□ -1.5
SF3A3-208ENST00000489537 GNRHR2Q96P88 292 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 TSSK2Q96PF2 358 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 OR14A2Q96R54 314 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 PDCD1LG2Q9BQ51 273 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 SOSTQ9BQB4 213 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 UQCC2Q9BRT2 126 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 ULBP2Q9BZM5 246 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 LINC00470Q9BZP3 86 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 HDHD2Q9H0R4 259 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 ABCG5Q9H222 651 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 SLCO5A1Q9H2Y9 848 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 RGCCQ9H4X1 137 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 PPP1R3EQ9H7J1 279 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 NOX4Q9NPH5 578 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 POLE4Q9NR33 117 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 PCDHB16Q9NRJ7 776 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 GLRX2Q9NS18 164 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 RBFOX1Q9NWB1 397 aaKnown RBP5.65□□□□□ -1.5
SF3A3-208ENST00000489537 MRPL22Q9NWU5 206 aaKnown RBP5.65□□□□□ -1.5
SF3A3-208ENST00000489537 SLCO1C1Q9NYB5 712 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 FOXJ2Q9P0K8 574 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 EXTL2Q9UBQ6 330 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 STEAP1Q9UHE8 339 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 NUFIP1Q9UHK0 495 aaKnown RBP5.65□□□□□ -1.5
SF3A3-208ENST00000489537 OR52A1Q9UKL2 312 aa5.65□□□□□ -1.5
SF3A3-208ENST00000489537 SIRT4Q9Y6E7 314 aaPredicted RBP5.65□□□□□ -1.5
SF3A3-208ENST00000489537 IGKV3D-15A0A087WSY6 115 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 LOC101059948A0A1B0GTJ6 334 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 A0A1W2PPL8 197 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 FUOMA2VDF0 154 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 TMEM8BA6NDV4 472 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 ZNF724A8MTY0 619 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 FAM171A2A8MVW0 826 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.64□□□□□ -1.51
SF3A3-208ENST00000489537 H3BUI4 141 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 H7C1C5 153 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 SULT1C2O00338 296 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 SLC17A2O00624 439 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 GSTZ1O43708 216 aaPredicted RBP5.64□□□□□ -1.51
SF3A3-208ENST00000489537 ORC5O43913 435 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 EFNA2O43921 213 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 NME2P1O60361 137 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 CYTIPO60759 359 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 BPNT1O95861 308 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 PRB1P04280 392 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 HNRNPCP07910 306 aaKnown RBP eCLIP5.64□□□□□ -1.51
SF3A3-208ENST00000489537 SP1P08047 785 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 CST2P09228 141 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 QDPRP09417 244 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 CLEC2LP0C7M8 214 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 UBBP0CG47 229 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 HLA-DOBP13765 273 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 NME2P22392 152 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 CD79BP40259 229 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 PSMB10P40306 273 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 EIF1AXP47813 144 aaKnown RBP5.64□□□□□ -1.51
SF3A3-208ENST00000489537 MMP15P51511 669 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 RAG2P55895 527 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 CLDN17P56750 224 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 RPS11P62280 158 aaKnown RBP eCLIP5.64□□□□□ -1.51
SF3A3-208ENST00000489537 LCN6P62502 163 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 ARG2P78540 354 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 SLC10A1Q14973 349 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 C1QTNF12Q5T7M4 302 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 FAM27BQ5VT28 67 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 RTL6Q6ICC9 239 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 LRFN4Q6PJG9 635 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 PCSK4Q6UW60 755 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 NHLRC1Q6VVB1 395 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 RPTNQ6XPR3 784 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 DOK3Q7L591 496 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 AAED1Q7RTV5 226 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 MCEMP1Q8IX19 187 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 CCDC36Q8IYA8 594 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 C20orf196Q8IYI0 205 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 ELMOD2Q8IZ81 293 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 GHDCQ8N2G8 530 aa5.64□□□□□ -1.51
SF3A3-208ENST00000489537 FAM109AQ8N4B1 249 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms