RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 CYB5R3P00387 301 aaPredicted RBP10.38□□□□□ -0.75
CPSF3-204ENST00000489403 PLATP00750 562 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 RPS2P15880 293 aaKnown RBP10.38□□□□□ -0.75
CPSF3-204ENST00000489403 SDHAP31040 664 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 RGS6P49758 472 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 IL13RA1P78552 427 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 HLXQ14774 488 aaPredicted RBP10.38□□□□□ -0.75
CPSF3-204ENST00000489403 SLC9A3R2Q15599 337 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 IFI44LQ53G44 452 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 OR2T2Q6IF00 324 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 LEG1Q6P5S2 330 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 C9orf139Q6ZV77 190 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 CBLL1Q75N03 491 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 HDXQ7Z353 690 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 TSEN54Q7Z6J9 526 aaKnown RBP10.38□□□□□ -0.75
CPSF3-204ENST00000489403 KLBQ86Z14 1044 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 OR8G5Q8NG78 346 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 OR1F12Q8NHA8 337 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 SLC7A13Q8TCU3 470 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 SLC25A28Q96A46 364 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 DACT3Q96B18 629 aaPredicted RBP10.38□□□□□ -0.75
CPSF3-204ENST00000489403 FAM46AQ96IP4 442 aaKnown RBP10.38□□□□□ -0.75
CPSF3-204ENST00000489403 HSH2DQ96JZ2 352 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 GPX7Q96SL4 187 aaPredicted RBP10.38□□□□□ -0.75
CPSF3-204ENST00000489403 RERGLQ9H628 205 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 VIPAS39Q9H9C1 493 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 NMNAT1Q9HAN9 279 aaPredicted RBP10.38□□□□□ -0.75
CPSF3-204ENST00000489403 TMEM165Q9HC07 324 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 NRIP3Q9NQ35 241 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 FGFR1OP2Q9NVK5 253 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 VSX1Q9NZR4 365 aaPredicted RBP10.38□□□□□ -0.75
CPSF3-204ENST00000489403 IL20RAQ9UHF4 553 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 ATPIF1Q9UII2 106 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 SIGLEC7Q9Y286 467 aa10.38□□□□□ -0.75
CPSF3-204ENST00000489403 IGHV3-64DA0A0J9YX35 117 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 MDFIC2A0A1B0GVS7 189 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 CXCR6O00574 342 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 PTP4A3O75365 173 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 NDUFB2O95178 105 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 GPANK1O95872 356 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 SERPINA1P01009 418 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 PPIAL4GP0DN37 164 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 MTNR1AP48039 350 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 FXYD6P3P58550 94 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 GNB2P62879 340 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 LIPEQ05469 1076 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 SLC27A4Q6P1M0 643 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 BTNL3Q6UXE8 466 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 LRRN1Q6UXK5 716 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 PTCHD4Q6ZW05 846 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 FKBP9P1Q75LS8 142 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 RRM2BQ7LG56 351 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 ARPINQ7Z6K5 226 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 GLB1L2Q8IW92 636 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 SLC15A3Q8IY34 581 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 POU5F2Q8N7G0 328 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 UPRTQ96BW1 309 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 SLC30A2Q9BRI3 323 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 TMEM246Q9BRR3 403 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 NDEL1Q9GZM8 345 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 NUAK2Q9H093 628 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 ANKRD19PQ9H560 264 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 ARMCX1Q9P291 453 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 TMEM5Q9Y2B1 443 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 AP3M1Q9Y2T2 418 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 CAPN7Q9Y6W3 813 aa10.37□□□□□ -0.75
CPSF3-204ENST00000489403 MGAM2Q2M2H8 2515 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 IQCF6A8MYZ5 107 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 F5H5P2 479 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 SOCS2O14508 198 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 MDKP21741 143 aaPredicted RBP10.36□□□□□ -0.75
CPSF3-204ENST00000489403 CPT2P23786 658 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 CDKN2AP42771 156 aaKnown RBP10.36□□□□□ -0.75
CPSF3-204ENST00000489403 OMPP47874 163 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 SRP9P49458 86 aaKnown RBP10.36□□□□□ -0.75
CPSF3-204ENST00000489403 KCNMB1Q16558 191 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 MEP1BQ16820 701 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 ZNF181Q2M3W8 571 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 ZNF404Q494X3 552 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 FAM201AQ5SY85 155 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 GPR139Q6DWJ6 353 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 TREML4Q6UXN2 200 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 ADCK1Q86TW2 530 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 MOGAT3Q86VF5 341 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 BHLHE23Q8NDY6 225 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 OR5L1Q8NGL2 311 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 OR13G1Q8NGZ3 307 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 RAB40AQ8WXH6 277 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 APOBEC3DQ96AK3 386 aaPredicted RBP10.36□□□□□ -0.75
CPSF3-204ENST00000489403 NEIL1Q96FI4 390 aaPredicted RBP10.36□□□□□ -0.75
CPSF3-204ENST00000489403 ZNF582Q96NG8 517 aaPredicted RBP10.36□□□□□ -0.75
CPSF3-204ENST00000489403 TSSK2Q96PF2 358 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 WDR76Q9H967 626 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 MIOXQ9UGB7 285 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 POLR1DQ9Y2S0 133 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 IER3IP1Q9Y5U9 82 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 LHFPL6Q9Y693 200 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 ENPP4Q9Y6X5 453 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 DOCK11Q5JSL3 2073 aa10.36□□□□□ -0.75
CPSF3-204ENST00000489403 POM121CA8CG34 1229 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms