RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 ZNF433Q8N7K0 673 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-207ENST00000489357 CCDC54Q8NEL0 328 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 NOXO1Q8NFA2 376 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 OR10H5Q8NGA6 315 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 OR10G3Q8NGC4 313 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 OR4K17Q8NGC6 315 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 OR6M1Q8NGM8 313 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 OR5H6Q8NGV6 325 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 POC1BQ8TC44 478 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 ST7LQ8TDW4 575 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 TSEN15Q8WW01 171 aaKnown RBP7.53□□□□□ -1.2
VTI1A-207ENST00000489357 WFDC12Q8WWY7 111 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 HSD17B8Q92506 261 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 AKAP1Q92667 903 aaKnown RBP eCLIP7.53□□□□□ -1.2
VTI1A-207ENST00000489357 MR1Q95460 341 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 UPRTQ96BW1 309 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 INTS12Q96CB8 462 aaKnown RBP7.53□□□□□ -1.2
VTI1A-207ENST00000489357 SLC25A38Q96DW6 304 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 SCMH1Q96GD3 660 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 MED30Q96HR3 178 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 ARL5BQ96KC2 179 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 GFI1Q99684 422 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 TTTY10Q9BZA0 68 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 MMP28Q9H239 520 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 SLCO5A1Q9H2Y9 848 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 C1orf198Q9H425 327 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 GALNT9Q9HCQ5 603 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 SH2D2AQ9NP31 389 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 DIABLOQ9NR28 239 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 DHDHQ9UQ10 334 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 MRPS18CQ9Y3D5 142 aaKnown RBP7.53□□□□□ -1.2
VTI1A-207ENST00000489357 PTRH2Q9Y3E5 179 aaKnown RBP7.53□□□□□ -1.2
VTI1A-207ENST00000489357 LRP12Q9Y561 859 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 HS3ST3B1Q9Y662 390 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 CFAP47Q6ZTR5 3102 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 LOC400499M0QZD8 3231 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 COL6A6A6NMZ7 2263 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 ITPR1Q14643 2758 aa7.53□□□□□ -1.2
VTI1A-207ENST00000489357 CNTRLQ7Z7A1 2325 aa7.52□□□□□ -1.2
VTI1A-207ENST00000489357 NSG1A0A0A6YYJ2 146 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 A0A0B4J293 547 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 LOC100289279A0A1B0GTE1 492 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 LOC101059948A0A1B0GTJ6 334 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 TEX51A0A1B0GUA7 166 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 LINC00854A0A1B0GVQ3 168 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 LOC390937A0A1W2PQ73 354 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 SULT1C2O00338 296 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 GMFGO60234 142 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 RAD1O60671 282 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 CBR3O75828 277 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 KRT33AO76009 404 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 ALX3O95076 343 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 C1QBP02746 253 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 TCRBP04435 133 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 ITGB2P05107 769 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 ERCC1P07992 297 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-207ENST00000489357 PGA4P0DJD7 388 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 PGA3P0DJD8 388 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 IGFBP3P17936 291 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-207ENST00000489357 ADRA2CP18825 462 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 WT1P19544 449 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-207ENST00000489357 NME2P22392 152 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 BTCP35070 178 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 P2RY4P51582 365 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 MECP2P51608 486 aaKnown RBP7.52□□□□□ -1.21
VTI1A-207ENST00000489357 MLF1P58340 268 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 LSM6P62312 80 aaKnown RBP7.52□□□□□ -1.21
VTI1A-207ENST00000489357 CSNK2A1P68400 391 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-207ENST00000489357 H3F3AP84243 136 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 LCN10Q6JVE6 187 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 H3F3CQ6NXT2 135 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 ANKRD16Q6P6B7 361 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 C6orf15Q6UXA7 325 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-207ENST00000489357 KRT74Q7RTS7 529 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 NOXA1Q86UR1 476 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-207ENST00000489357 FAM109AQ8N4B1 249 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 ESX1Q8N693 406 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 WDSUB1Q8N9V3 476 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 OR11G2Q8NGC1 345 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 SYNPRQ8TBG9 265 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 THAP3Q8WTV1 239 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-207ENST00000489357 KCNE4Q8WWG9 221 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 ASB5Q8WWX0 329 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 PHF21AQ96BD5 680 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 RNF31Q96EP0 1072 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 ZFP3Q96NJ6 502 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 NUDT16L1Q9BRJ7 211 aaKnown RBP7.52□□□□□ -1.21
VTI1A-207ENST00000489357 UTP23Q9BRU9 249 aaKnown RBP7.52□□□□□ -1.21
VTI1A-207ENST00000489357 NAA11Q9BSU3 229 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-207ENST00000489357 CACNG6Q9BXT2 260 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 PRORYQ9H606 182 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 SCPEP1Q9HB40 452 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 MCUBQ9NWR8 336 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 ANKRD10Q9NXR5 420 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 STMN3Q9NZ72 180 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 B3GAT1Q9P2W7 334 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 OR5V1Q9UGF6 321 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 CYB5R1Q9UHQ9 305 aa7.52□□□□□ -1.21
VTI1A-207ENST00000489357 PADI1Q9ULC6 663 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms