RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 GNPDA2Q8TDQ7 276 aa19.47■□□□□ 0.71
COL9A3-213ENST00000489045 HAVCR1Q96D42 359 aa19.47■□□□□ 0.71
COL9A3-213ENST00000489045 FAHD2AQ96GK7 314 aa19.47■□□□□ 0.71
COL9A3-213ENST00000489045 DCLRE1CQ96SD1 692 aaKnown RBP19.47■□□□□ 0.71
COL9A3-213ENST00000489045 METTL17Q9H7H0 456 aaPredicted RBP19.47■□□□□ 0.71
COL9A3-213ENST00000489045 RPRD1BQ9NQG5 326 aaKnown RBP19.47■□□□□ 0.71
COL9A3-213ENST00000489045 G6PC2Q9NQR9 355 aa19.47■□□□□ 0.71
COL9A3-213ENST00000489045 DCAF16Q9NXF7 216 aa19.47■□□□□ 0.71
COL9A3-213ENST00000489045 METRNQ9UJH8 293 aa19.47■□□□□ 0.71
COL9A3-213ENST00000489045 PLPP2O43688 288 aa19.46■□□□□ 0.71
COL9A3-213ENST00000489045 PNPP00491 289 aa19.46■□□□□ 0.71
COL9A3-213ENST00000489045 ATP6V1B2P21281 511 aa19.46■□□□□ 0.71
COL9A3-213ENST00000489045 TNFSF4P23510 183 aa19.46■□□□□ 0.71
COL9A3-213ENST00000489045 NOS3P29474 1203 aa19.46■□□□□ 0.71
COL9A3-213ENST00000489045 RGS6P49758 472 aa19.46■□□□□ 0.71
COL9A3-213ENST00000489045 TSPAN31Q12999 210 aa19.46■□□□□ 0.71
COL9A3-213ENST00000489045 SHQ1Q6PI26 577 aaKnown RBP19.46■□□□□ 0.71
COL9A3-213ENST00000489045 SDR9C7Q8NEX9 313 aa19.46■□□□□ 0.71
COL9A3-213ENST00000489045 SLC26A10Q8NG04 563 aa19.46■□□□□ 0.71
COL9A3-213ENST00000489045 PTP4A1Q93096 173 aa19.46■□□□□ 0.71
COL9A3-213ENST00000489045 COQ7Q99807 217 aa19.46■□□□□ 0.71
COL9A3-213ENST00000489045 HDHD2Q9H0R4 259 aa19.46■□□□□ 0.71
COL9A3-213ENST00000489045 FN3KQ9H479 309 aa19.46■□□□□ 0.71
COL9A3-213ENST00000489045 PTTG3PQ9NZH4 202 aa19.46■□□□□ 0.71
COL9A3-213ENST00000489045 ARHGAP32A7KAX9 2087 aa19.45■□□□□ 0.7
COL9A3-213ENST00000489045 J3QW42 95 aa19.45■□□□□ 0.7
COL9A3-213ENST00000489045 RBMXP38159 391 aaKnown RBP19.45■□□□□ 0.7
COL9A3-213ENST00000489045 COX10Q12887 443 aa19.45■□□□□ 0.7
COL9A3-213ENST00000489045 HLXQ14774 488 aaPredicted RBP19.45■□□□□ 0.7
COL9A3-213ENST00000489045 PEG10Q86TG7 708 aaKnown RBP19.45■□□□□ 0.7
COL9A3-213ENST00000489045 OR5AS1Q8N127 324 aa19.45■□□□□ 0.7
COL9A3-213ENST00000489045 FITM2Q8N6M3 262 aa19.45■□□□□ 0.7
COL9A3-213ENST00000489045 UBAP1Q9NZ09 502 aa19.45■□□□□ 0.7
COL9A3-213ENST00000489045 ACTR3BQ9P1U1 418 aa19.45■□□□□ 0.7
COL9A3-213ENST00000489045 LYVE1Q9Y5Y7 322 aa19.45■□□□□ 0.7
COL9A3-213ENST00000489045 OR6C68A6NDL8 312 aa19.44■□□□□ 0.7
COL9A3-213ENST00000489045 IDH3BO43837 385 aa19.44■□□□□ 0.7
COL9A3-213ENST00000489045 RAC2P15153 192 aa19.44■□□□□ 0.7
COL9A3-213ENST00000489045 MNAT1P51948 309 aa19.44■□□□□ 0.7
COL9A3-213ENST00000489045 SLC35F1Q5T1Q4 408 aa19.44■□□□□ 0.7
COL9A3-213ENST00000489045 FBXW12Q6X9E4 464 aa19.44■□□□□ 0.7
COL9A3-213ENST00000489045 ZBTB46Q86UZ6 589 aa19.44■□□□□ 0.7
COL9A3-213ENST00000489045 LINC00346Q8IVM7 164 aa19.44■□□□□ 0.7
COL9A3-213ENST00000489045 OR9Q2Q8NGE9 314 aa19.44■□□□□ 0.7
COL9A3-213ENST00000489045 ITLN1Q8WWA0 313 aa19.44■□□□□ 0.7
COL9A3-213ENST00000489045 APOBEC3DQ96AK3 386 aaPredicted RBP19.44■□□□□ 0.7
COL9A3-213ENST00000489045 EGLN3Q9H6Z9 239 aa19.44■□□□□ 0.7
COL9A3-213ENST00000489045 TMEM106BQ9NUM4 274 aa19.44■□□□□ 0.7
COL9A3-213ENST00000489045 NPTNQ9Y639 398 aa19.44■□□□□ 0.7
COL9A3-213ENST00000489045 B2RBV5 119 aa19.43■□□□□ 0.7
COL9A3-213ENST00000489045 KRT36O76013 467 aa19.43■□□□□ 0.7
COL9A3-213ENST00000489045 TNFRSF1AP19438 455 aa19.43■□□□□ 0.7
COL9A3-213ENST00000489045 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.43■□□□□ 0.7
COL9A3-213ENST00000489045 CLEC12AQ5QGZ9 265 aa19.43■□□□□ 0.7
COL9A3-213ENST00000489045 OR2T2Q6IF00 324 aa19.43■□□□□ 0.7
COL9A3-213ENST00000489045 SLC18B1Q6NT16 456 aa19.43■□□□□ 0.7
COL9A3-213ENST00000489045 CFAP77Q6ZQR2 320 aa19.43■□□□□ 0.7
COL9A3-213ENST00000489045 C1orf229Q6ZS94 237 aaPredicted RBP19.43■□□□□ 0.7
COL9A3-213ENST00000489045 OR52E2Q8NGJ4 325 aa19.43■□□□□ 0.7
COL9A3-213ENST00000489045 OR5L1Q8NGL2 311 aa19.43■□□□□ 0.7
COL9A3-213ENST00000489045 BTBD10Q9BSF8 475 aa19.43■□□□□ 0.7
COL9A3-213ENST00000489045 OCEL1Q9H607 264 aa19.43■□□□□ 0.7
COL9A3-213ENST00000489045 IL19Q9UHD0 177 aa19.43■□□□□ 0.7
COL9A3-213ENST00000489045 CDH10Q9Y6N8 788 aa19.43■□□□□ 0.7
COL9A3-213ENST00000489045 LOC105371242A0A075B767 164 aa19.42■□□□□ 0.7
COL9A3-213ENST00000489045 A0A0G2JMP0 313 aa19.42■□□□□ 0.7
COL9A3-213ENST00000489045 A0A0X1KG70 313 aa19.42■□□□□ 0.7
COL9A3-213ENST00000489045 TNFRSF11BO00300 401 aa19.42■□□□□ 0.7
COL9A3-213ENST00000489045 AVPP01185 164 aa19.42■□□□□ 0.7
COL9A3-213ENST00000489045 IGHV2-70P01814 119 aa19.42■□□□□ 0.7
COL9A3-213ENST00000489045 HLA-DQA2P01906 255 aa19.42■□□□□ 0.7
COL9A3-213ENST00000489045 HMGA2P52926 109 aa19.42■□□□□ 0.7
COL9A3-213ENST00000489045 SLC36A3Q495N2 470 aa19.42■□□□□ 0.7
COL9A3-213ENST00000489045 ZNF283Q8N7M2 679 aa19.42■□□□□ 0.7
COL9A3-213ENST00000489045 OR4M2Q8NGB6 313 aa19.42■□□□□ 0.7
COL9A3-213ENST00000489045 OR52L1Q8NGH7 329 aa19.42■□□□□ 0.7
COL9A3-213ENST00000489045 OR2V2Q96R30 315 aa19.42■□□□□ 0.7
COL9A3-213ENST00000489045 CCT8L2Q96SF2 557 aa19.42■□□□□ 0.7
COL9A3-213ENST00000489045 TMPRSS13Q9BYE2 586 aa19.42■□□□□ 0.7
COL9A3-213ENST00000489045 TCRBV5S2A0A599 114 aa19.41■□□□□ 0.7
COL9A3-213ENST00000489045 SURF4O15260 269 aa19.41■□□□□ 0.7
COL9A3-213ENST00000489045 MAGEA2P43356 314 aa19.41■□□□□ 0.7
COL9A3-213ENST00000489045 RSPO1Q2MKA7 263 aaPredicted RBP19.41■□□□□ 0.7
COL9A3-213ENST00000489045 DCAF12L2Q5VW00 463 aa19.41■□□□□ 0.7
COL9A3-213ENST00000489045 RPL13AP3Q6NVV1 102 aa19.41■□□□□ 0.7
COL9A3-213ENST00000489045 OR10AD1Q8NGE0 317 aa19.41■□□□□ 0.7
COL9A3-213ENST00000489045 OR4C15Q8NGM1 316 aa19.41■□□□□ 0.7
COL9A3-213ENST00000489045 NSL1Q96IY1 281 aa19.41■□□□□ 0.7
COL9A3-213ENST00000489045 PITX2Q99697 317 aa19.41■□□□□ 0.7
COL9A3-213ENST00000489045 PLA2G12AQ9BZM1 189 aa19.41■□□□□ 0.7
COL9A3-213ENST00000489045 TRIM15Q9C019 465 aa19.41■□□□□ 0.7
COL9A3-213ENST00000489045 PPP1R3CQ9UQK1 317 aa19.41■□□□□ 0.7
COL9A3-213ENST00000489045 BHLHE40O14503 412 aa19.4■□□□□ 0.7
COL9A3-213ENST00000489045 SBK2P0C263 348 aa19.4■□□□□ 0.7
COL9A3-213ENST00000489045 GGT2P36268 569 aa19.4■□□□□ 0.7
COL9A3-213ENST00000489045 LCN2P80188 198 aa19.4■□□□□ 0.7
COL9A3-213ENST00000489045 PPP1R8Q12972 351 aaKnown RBP19.4■□□□□ 0.7
COL9A3-213ENST00000489045 SCGB2A2Q13296 93 aa19.4■□□□□ 0.7
COL9A3-213ENST00000489045 KRTAP27-1Q3LI81 207 aa19.4■□□□□ 0.7
COL9A3-213ENST00000489045 ARHGAP24Q8N264 748 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms