RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 HDHD5Q9BXW7 423 aa7.03□□□□□ -1.28
TRAPPC12-221ENST00000489032 MEPEQ9NQ76 525 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC12-221ENST00000489032 RASSF1Q9NS23 344 aa7.03□□□□□ -1.28
TRAPPC12-221ENST00000489032 MAN2C1Q9NTJ4 1040 aa7.03□□□□□ -1.28
TRAPPC12-221ENST00000489032 SMPD3Q9NY59 655 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC12-221ENST00000489032 RCE1Q9Y256 329 aa7.03□□□□□ -1.28
TRAPPC12-221ENST00000489032 ORC6Q9Y5N6 252 aa7.03□□□□□ -1.28
TRAPPC12-221ENST00000489032 FLVCR1Q9Y5Y0 555 aa7.03□□□□□ -1.28
TRAPPC12-221ENST00000489032 MPDZO75970 2070 aa7.03□□□□□ -1.28
TRAPPC12-221ENST00000489032 ATRQ13535 2644 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 INTS1Q8N201 2190 aaKnown RBP7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 TRBV4-1A0A0J9YWV2 114 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 A0A1W2PRG6 482 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 MCIDASD6RGH6 385 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 H0YAE9 185 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 C16orf97H3BN30 126 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 EI24O14681 340 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 RRHO14718 337 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 CASKO14936 926 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 SERPINI2O75830 405 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 LY6G6DO95868 133 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 PLAUP00749 431 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 ASAH2BP0C7U1 165 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 IL32P24001 234 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 MPGP29372 298 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 MAGEA2P43356 314 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 DAP3P51398 398 aaKnown RBP7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 P2RY4P51582 365 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 ALDH3A2P51648 485 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 PRPS1P60891 318 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 POU3F1Q03052 451 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 TGFBR3Q03167 851 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 TFF3Q07654 80 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 ZP4Q12836 540 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 FBXW9Q5XUX1 488 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 NIPAL3Q6P499 406 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 ZNF474Q6S9Z5 364 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 UGT2A3Q6UWM9 527 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 Q6ZT83 130 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 SLC46A3Q7Z3Q1 461 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 TSEN54Q7Z6J9 526 aaKnown RBP7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 OAFQ86UD1 273 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 STEAP2Q8NFT2 490 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 OR4K5Q8NGD3 323 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 LIPHQ8WWY8 451 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 NRBF2Q96F24 287 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 CNBD2Q96M20 576 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 ADAD1Q96M93 576 aaKnown RBP7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 POLDIP3Q9BY77 421 aaKnown RBP7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 ANKRD60Q9BZ19 345 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 SLCO5A1Q9H2Y9 848 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 LIME1Q9H400 295 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 NTN4Q9HB63 628 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 B3GAT2Q9NPZ5 323 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 C20orf141Q9NUB4 165 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 SEC14L4Q9UDX3 406 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 PLEKHA6Q9Y2H5 1048 aa7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 SAMHD1Q9Y3Z3 626 aaKnown RBP7.02□□□□□ -1.29
TRAPPC12-221ENST00000489032 AKAP6Q13023 2319 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 CIB4A0PJX0 185 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 SH3PXD2BA1X283 911 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 TUBAL3A6NHL2 446 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 ZNF587BE7ETH6 402 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 MS4A18H0YCH9 400 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 PDLIM1O00151 329 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 CCNB2O95067 398 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 BCL10O95999 233 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 ADAP00813 363 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 IGHV3-9P01782 118 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 NR2C1P13056 603 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 CDH2P19022 906 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 MYF6P23409 242 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 RPL4P36578 427 aaKnown RBP7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 CAPGP40121 348 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 AQP2P41181 271 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 GPR4P46093 362 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 RPS6KA3P51812 740 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 RAD23AP54725 363 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 RPL18Q07020 188 aaKnown RBP7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 FAM27E3Q08E93 113 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 ITGADQ13349 1161 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 MS4A18Q3C1V0 323 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 ZBED5Q49AG3 693 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 IQCCQ4KMZ1 466 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 ALG10Q5BKT4 473 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 TTC23Q5W5X9 447 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 SHQ1Q6PI26 577 aaKnown RBP7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 TBPL2Q6SJ96 375 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 TMPRSS11FQ6ZWK6 438 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 SLC35D2Q76EJ3 337 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 BHLHA15Q7RTS1 189 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 SSX8Q7RTT4 187 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 EPHX4Q8IUS5 362 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 GPR137CQ8N3F9 429 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 LRRC17Q8N6Y2 441 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 ZNF555Q8NEP9 628 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 OR6N1Q8NGY5 312 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 OR51A7Q8NH64 312 aa7.01□□□□□ -1.29
TRAPPC12-221ENST00000489032 GNPDA2Q8TDQ7 276 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms