RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 SEC61A1P61619 476 aaKnown RBP11.3□□□□□ -0.6
CLIC4-202ENST00000488683 TLE3Q04726 772 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 KCTD18Q6PI47 426 aaPredicted RBP11.3□□□□□ -0.6
CLIC4-202ENST00000488683 COMMD2Q86X83 199 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 STPG2Q8N412 459 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 ST7LQ8TDW4 575 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 GPX8Q8TED1 209 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 NPRL2Q8WTW4 380 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 ZNF775Q96BV0 537 aaPredicted RBP11.3□□□□□ -0.6
CLIC4-202ENST00000488683 OR6C1Q96RD1 312 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 KLRF1Q9NZS2 232 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 SPEF1Q9Y4P9 236 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 CFAP47Q6ZTR5 3102 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 TRBV11-1A0A0K0K1C0 115 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 PPP3CBP16298 524 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 FAUP35544 74 aaKnown RBP11.3□□□□□ -0.6
CLIC4-202ENST00000488683 RAB14P61106 215 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 RAP2BP61225 183 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 PMPCAQ10713 525 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 CFAP77Q6ZQR2 320 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 OR10G3Q8NGC4 313 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 OR10S1Q8NGN2 331 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 ASB10Q8WXI3 467 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 WDR13Q9H1Z4 485 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 TTYH1Q9H313 450 aaPredicted RBP11.3□□□□□ -0.6
CLIC4-202ENST00000488683 CACNA1EQ15878 2313 aa11.3□□□□□ -0.6
CLIC4-202ENST00000488683 F5H5P2 479 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 RLN2P04090 185 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 OR4E1P0C645 316 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 TDGQ13569 410 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 C3orf33Q6P1S2 294 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 NAA40Q86UY6 237 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.29□□□□□ -0.6
CLIC4-202ENST00000488683 CADM4Q8NFZ8 388 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 OR5D18Q8NGL1 313 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 CASTOR1Q8WTX7 329 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 C11orf40Q8WZ69 217 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 ZC3H10Q96K80 434 aaKnown RBP11.29□□□□□ -0.6
CLIC4-202ENST00000488683 CHRDQ9H2X0 955 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 R4GMQ9 66 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 UBE2QL1A1L167 161 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 TMEM200CA6NKL6 621 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 SHOXO15266 292 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 TPPPO94811 219 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 H2BFMP0C1H6 154 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 RRASP10301 218 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 AVPR2P30518 371 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 PTGS2P35354 604 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 CDNFQ49AH0 187 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 NHLRC3Q5JS37 347 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 GALNT11Q8NCW6 608 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 OR51E1Q8TCB6 317 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 MAFIPQ8WZ33 124 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 WBP1Q96G27 269 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 BANF2Q9H503 90 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 TAS2R8Q9NYW2 309 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 ZNF319Q9P2F9 582 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 IGHV3-15A0A0B4J1V0 119 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 TEX51A0A1B0GUA7 166 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 OR6C76A6NM76 312 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 E9PLN8 166 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 ZNHIT1O43257 154 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 OR2J2O76002 312 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 PI3P19957 117 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 CRABP1P29762 137 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 HSF1Q00613 529 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 UNC119Q13432 240 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 LY6G6FQ5SQ64 297 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 GLT8D1Q68CQ7 371 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 GUSBP11Q6P575 273 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 BPIFB2Q8N4F0 458 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 PAQR4Q8N4S7 273 aaPredicted RBP11.29□□□□□ -0.6
CLIC4-202ENST00000488683 RBPMSQ93062 196 aaKnown RBP11.29□□□□□ -0.6
CLIC4-202ENST00000488683 PNPLA2Q96AD5 504 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 KCNK17Q96T54 332 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 KLHL13Q9P2N7 655 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 CKLFQ9UBR5 152 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 VSIG4Q9Y279 399 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 RHBDD3Q9Y3P4 386 aa11.29□□□□□ -0.6
CLIC4-202ENST00000488683 TRAV14DV4A0A0A6YYC5 116 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 LOC105371267A0A1B0GV96 52 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 TMEM82A0PJX8 343 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 TTLL8A6PVC2 850 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 TSPAN4O14817 238 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 OR2T1O43869 369 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 CD2P06729 351 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 HEXBP07686 556 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 NMBP08949 121 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 GLB1P16278 677 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 S100A11P31949 105 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 DLX5P56178 289 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 BTN1A1Q13410 526 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 TUSC1Q2TAM9 212 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 WDR45BQ5MNZ6 344 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 ATPAF1Q5TC12 328 aaPredicted RBP11.28□□□□□ -0.6
CLIC4-202ENST00000488683 FJX1Q86VR8 437 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 DTX1Q86Y01 620 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 ADAD2Q8NCV1 583 aaKnown RBP11.28□□□□□ -0.6
CLIC4-202ENST00000488683 PLPP5Q8NEB5 264 aa11.28□□□□□ -0.6
CLIC4-202ENST00000488683 STEAP2Q8NFT2 490 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms