RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 RDH5Q92781 318 aa13.59□□□□□ -0.23
CTDSP1-209ENST00000488627 PTP4A1Q93096 173 aa13.59□□□□□ -0.23
CTDSP1-209ENST00000488627 MAP6Q96JE9 813 aa13.59□□□□□ -0.23
CTDSP1-209ENST00000488627 DCLRE1CQ96SD1 692 aaKnown RBP13.59□□□□□ -0.23
CTDSP1-209ENST00000488627 HDHD2Q9H0R4 259 aa13.59□□□□□ -0.23
CTDSP1-209ENST00000488627 TUBG2Q9NRH3 451 aa13.59□□□□□ -0.23
CTDSP1-209ENST00000488627 CMC2Q9NRP2 79 aa13.59□□□□□ -0.23
CTDSP1-209ENST00000488627 KCNG2Q9UJ96 466 aa13.59□□□□□ -0.23
CTDSP1-209ENST00000488627 SONP18583 2426 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 TVP23AA6NH52 213 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 ZSCAN5BA6NJL1 495 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 TLX2O43763 284 aaPredicted RBP13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 E2F6O75461 281 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 TIPRLO75663 272 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 HLA-DQA2P01906 255 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 GYPBP06028 91 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 ADH4P08319 380 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 ANXA8P13928 327 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 SPI1P17947 270 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 GRK5P34947 590 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 CCL8P80075 99 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 PCK2Q16822 640 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 PCGF3Q3KNV8 242 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 LINC01590Q5TEZ4 76 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 TMEM154Q6P9G4 183 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 SHQ1Q6PI26 577 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 ASRGL1Q7L266 308 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 ZNF511Q8NB15 262 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 SNX33Q8WV41 574 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 HAVCR1Q96D42 359 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 NRBF2Q96F24 287 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 DUS3LQ96G46 650 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 CDADC1Q9BWV3 514 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 HCAR1Q9BXC0 346 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 WDR76Q9H967 626 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 CHODLQ9H9P2 273 aa13.58□□□□□ -0.24
CTDSP1-209ENST00000488627 H3BN98 237 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 J3QW42 95 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 IGHV1-46P01743 117 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 OSMP13725 252 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 ZNF23P17027 643 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 KITLGP21583 273 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 ACHEP22303 614 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 RPS27P42677 84 aaKnown RBP13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 ZNF81P51508 661 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 CDK5Q00535 292 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 CCNIQ14094 377 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 GINS1Q14691 196 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 TRIP10Q15642 601 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 KRTAP21-3Q3LHN1 58 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 C6orf52Q5T4I8 152 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 OR2AJ1Q8NGZ0 328 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 TEX47Q8TBZ9 253 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 CMBLQ96DG6 245 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 SOX7Q9BT81 388 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 ZNF275Q9NSD4 429 aaPredicted RBP13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 PURGQ9UJV8 347 aaKnown RBP13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 COMMD3-BMI1R4GMX3 469 aa13.57□□□□□ -0.24
CTDSP1-209ENST00000488627 LRP5LA4QPB2 252 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 FAM183AA6NL82 134 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 RIIAD1A6NNX1 92 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 SPRY3O43610 288 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 DEAF1O75398 565 aaPredicted RBP13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 IFNGP01579 166 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 ACSM4P0C7M7 580 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 ZNF823P16415 610 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 POU1F1P28069 291 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 LIPAP38571 399 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 CRYBB2P43320 205 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 RGS6P49758 472 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 TMEM33P57088 247 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 ECH1Q13011 328 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 ATP6AP1Q15904 470 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 SPRNQ5BIV9 151 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 TEX30Q5JUR7 227 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 FAM209AQ5JX71 171 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 C1orf146Q5VVC0 180 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 CYB5R2Q6BCY4 276 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 SLC27A4Q6P1M0 643 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 FAHD1Q6P587 224 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 Q6ZR03 302 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 NAA40Q86UY6 237 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 COG8Q96MW5 612 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 PITX2Q99697 317 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 ATF6BQ99941 703 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 C1QTNF5Q9BXJ0 243 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 MED20Q9H944 212 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 ZNF556Q9HAH1 456 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 MSL2Q9HCI7 577 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 YAE1D1Q9NRH1 226 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 CYSLTR2Q9NS75 346 aa13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 CGGBP1Q9UFW8 167 aaPredicted RBP13.56□□□□□ -0.24
CTDSP1-209ENST00000488627 F5H5K5 113 aa13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 WNT9BO14905 357 aa13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 CRLF1O75462 422 aa13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 MT-ND5P03915 603 aa13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 RAC2P15153 192 aa13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 ZNF3P17036 446 aa13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 FMO3P31513 532 aa13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 IL2RGP31785 369 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms