RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 PSG7Q13046 419 aa12.1□□□□□ -0.47
COL9A2-208ENST00000488463 CARTPTQ16568 116 aa12.1□□□□□ -0.47
COL9A2-208ENST00000488463 PCK2Q16822 640 aa12.1□□□□□ -0.47
COL9A2-208ENST00000488463 C6orf52Q5T4I8 152 aa12.1□□□□□ -0.47
COL9A2-208ENST00000488463 LINC01590Q5TEZ4 76 aa12.1□□□□□ -0.47
COL9A2-208ENST00000488463 COLCA1Q6ZS62 124 aa12.1□□□□□ -0.47
COL9A2-208ENST00000488463 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.1□□□□□ -0.47
COL9A2-208ENST00000488463 LINC00346Q8IVM7 164 aa12.1□□□□□ -0.47
COL9A2-208ENST00000488463 OR2T33Q8NG76 320 aa12.1□□□□□ -0.47
COL9A2-208ENST00000488463 OR9Q1Q8NGQ5 310 aa12.1□□□□□ -0.47
COL9A2-208ENST00000488463 MAP6Q96JE9 813 aa12.1□□□□□ -0.47
COL9A2-208ENST00000488463 COQ7Q99807 217 aa12.1□□□□□ -0.47
COL9A2-208ENST00000488463 SOX7Q9BT81 388 aa12.1□□□□□ -0.47
COL9A2-208ENST00000488463 HCAR1Q9BXC0 346 aa12.1□□□□□ -0.47
COL9A2-208ENST00000488463 CMC2Q9NRP2 79 aa12.1□□□□□ -0.47
COL9A2-208ENST00000488463 PDP1Q9P0J1 537 aaPredicted RBP12.1□□□□□ -0.47
COL9A2-208ENST00000488463 BAIAP2Q9UQB8 552 aa12.1□□□□□ -0.47
COL9A2-208ENST00000488463 TLX2O43763 284 aaPredicted RBP12.09□□□□□ -0.47
COL9A2-208ENST00000488463 CLUP10909 449 aa12.09□□□□□ -0.47
COL9A2-208ENST00000488463 ZNF23P17027 643 aa12.09□□□□□ -0.47
COL9A2-208ENST00000488463 CENPAP49450 140 aa12.09□□□□□ -0.47
COL9A2-208ENST00000488463 SELENOVP59797 346 aa12.09□□□□□ -0.47
COL9A2-208ENST00000488463 CCNIQ14094 377 aa12.09□□□□□ -0.47
COL9A2-208ENST00000488463 GGTLC2Q14390 218 aa12.09□□□□□ -0.47
COL9A2-208ENST00000488463 TRIP10Q15642 601 aa12.09□□□□□ -0.47
COL9A2-208ENST00000488463 SPRNQ5BIV9 151 aa12.09□□□□□ -0.47
COL9A2-208ENST00000488463 ACSM5Q6NUN0 579 aa12.09□□□□□ -0.47
COL9A2-208ENST00000488463 UNQ6126/PRO20091Q6UXV3 157 aa12.09□□□□□ -0.47
COL9A2-208ENST00000488463 IQCF1Q8N6M8 205 aa12.09□□□□□ -0.47
COL9A2-208ENST00000488463 ZNF540Q8NDQ6 660 aa12.09□□□□□ -0.47
COL9A2-208ENST00000488463 OR51L1Q8NGJ5 315 aa12.09□□□□□ -0.47
COL9A2-208ENST00000488463 OR2T4Q8NH00 348 aa12.09□□□□□ -0.47
COL9A2-208ENST00000488463 RDH5Q92781 318 aa12.09□□□□□ -0.47
COL9A2-208ENST00000488463 DUS3LQ96G46 650 aaKnown RBP12.09□□□□□ -0.47
COL9A2-208ENST00000488463 DCLRE1CQ96SD1 692 aaKnown RBP12.09□□□□□ -0.47
COL9A2-208ENST00000488463 HDHD2Q9H0R4 259 aa12.09□□□□□ -0.47
COL9A2-208ENST00000488463 KCNG2Q9UJ96 466 aa12.09□□□□□ -0.47
COL9A2-208ENST00000488463 GRIP1Q9Y3R0 1128 aa12.09□□□□□ -0.47
COL9A2-208ENST00000488463 TVP23AA6NH52 213 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 J3QW42 95 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 TIPRLO75663 272 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 IGHV1-46P01743 117 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 GYPBP06028 91 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 SPI1P17947 270 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 KITLGP21583 273 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 ACHEP22303 614 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 TUBG1P23258 451 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 ANOS1P23352 680 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 GCH1P30793 250 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 IL2RGP31785 369 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 GRK5P34947 590 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 RPS27P42677 84 aaKnown RBP12.08□□□□□ -0.48
COL9A2-208ENST00000488463 ARHGDIAP52565 204 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 CCL8P80075 99 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 PCGF3Q3KNV8 242 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 C1orf146Q5VVC0 180 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 SHQ1Q6PI26 577 aaKnown RBP12.08□□□□□ -0.48
COL9A2-208ENST00000488463 ARL9Q6T311 187 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 Q6ZR03 302 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 PROKR2Q8NFJ6 384 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 PTP4A1Q93096 173 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 HAVCR1Q96D42 359 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 MSI2Q96DH6 328 aaKnown RBP12.08□□□□□ -0.48
COL9A2-208ENST00000488463 C1orf159Q96HA4 380 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 C1QTNF5Q9BXJ0 243 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 YY1AP1Q9H869 796 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 WDR76Q9H967 626 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 CHODLQ9H9P2 273 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 TUBG2Q9NRH3 451 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 ZNF275Q9NSD4 429 aaPredicted RBP12.08□□□□□ -0.48
COL9A2-208ENST00000488463 GPR160Q9UJ42 338 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 POLR1DQ9Y2S0 133 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 COMMD3-BMI1R4GMX3 469 aa12.08□□□□□ -0.48
COL9A2-208ENST00000488463 LRP5LA4QPB2 252 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 GNGT2O14610 69 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 WNT9BO14905 357 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 CRLF1O75462 422 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 ACSM4P0C7M7 580 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 OSMP13725 252 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 OTX1P32242 354 aaPredicted RBP12.07□□□□□ -0.48
COL9A2-208ENST00000488463 CRYBB2P43320 205 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 ZNF81P51508 661 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 CDK5Q00535 292 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 CDK5R2Q13319 367 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 MOGQ16653 247 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 TEX30Q5JUR7 227 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 FAM209AQ5JX71 171 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 FAHD1Q6P587 224 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 TMEM154Q6P9G4 183 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 FBXW12Q6X9E4 464 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 NAA40Q86UY6 237 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 ZNF511Q8NB15 262 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 SNX33Q8WV41 574 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 CMBLQ96DG6 245 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 NRBF2Q96F24 287 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 MED20Q9H944 212 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 MARCH7Q9H992 704 aa12.07□□□□□ -0.48
COL9A2-208ENST00000488463 DDX28Q9NUL7 540 aaKnown RBP12.07□□□□□ -0.48
COL9A2-208ENST00000488463 PURGQ9UJV8 347 aaKnown RBP12.07□□□□□ -0.48
COL9A2-208ENST00000488463 CACNG2Q9Y698 323 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms