RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 ADA2Q9NZK5 511 aa9.44□□□□□ -0.9
PCYT1A-215ENST00000488235 SOX21Q9Y651 276 aaPredicted RBP9.44□□□□□ -0.9
PCYT1A-215ENST00000488235 C5orf63A6NC05 138 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 F5H0A9 414 aaPredicted RBP9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 TMEM178BH3BS89 294 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 MLNRO43193 412 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 CYB5R3P00387 301 aaPredicted RBP9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 PSKH1P11801 424 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 HIST1H1CP16403 213 aaKnown RBP9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 PMELP40967 661 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 SLC6A9P48067 706 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 CENPAP49450 140 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 MMP16P51512 607 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 BTG1P62324 171 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 SLC3A1Q07837 685 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 TUSC1Q2TAM9 212 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 KRTAP27-1Q3LI81 207 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 FAM201AQ5SY85 155 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 LEG1Q6P5S2 330 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 ARL9Q6T311 187 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 C12orf54Q6X4T0 127 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 DPY19L2P2Q6ZN68 376 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 ADCK1Q86TW2 530 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 NAA40Q86UY6 237 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 LRRC28Q86X40 367 aaPredicted RBP9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 LINC00346Q8IVM7 164 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 BCL6BQ8N143 479 aaPredicted RBP9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 BHLHE23Q8NDY6 225 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 SLC26A10Q8NG04 563 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 FANK1Q8TC84 345 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 FAM216AQ8WUB2 273 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 ZFAND2BQ8WV99 257 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 PTP4A1Q93096 173 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 CMTM5Q96DZ9 223 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 PYURFQ96I23 114 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 SAMD8Q96LT4 415 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 ERMAPQ96PL5 475 aaPredicted RBP9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 NMNAT3Q96T66 252 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 WACQ9BTA9 647 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 C1QTNF5Q9BXJ0 243 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 PLA2G12AQ9BZM1 189 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 OR52D1Q9H346 318 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 GORASP2Q9H8Y8 452 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 PATZ1Q9HBE1 687 aaKnown RBP9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 SRA1Q9HD15 236 aaKnown RBP9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 MED4Q9NPJ6 270 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 IL19Q9UHD0 177 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 RPS6KA6Q9UK32 745 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 B9D1Q9UPM9 204 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 PPP1R3CQ9UQK1 317 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 FAM32AQ9Y421 112 aaKnown RBP9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 VWFP04275 2813 aa9.43□□□□□ -0.9
PCYT1A-215ENST00000488235 TMEM89A2RUT3 159 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 OR6C68A6NDL8 312 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 CEACAM18A8MTB9 384 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 SNX3O60493 162 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 RAC2P15153 192 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 GGT2P36268 569 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 COMPP49747 757 aaPredicted RBP9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 RPS6KA3P51812 740 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 ACTG1P63261 375 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 SPIBQ01892 262 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 RFX4Q33E94 735 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 HSP90B2PQ58FF3 399 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 ZMAT1Q5H9K5 638 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 SLC18B1Q6NT16 456 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 LYPD4Q6UWN0 246 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 FBXW12Q6X9E4 464 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 ATG16L2Q8NAA4 619 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 SDR9C7Q8NEX9 313 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 OR4K13Q8NH42 304 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 NANPQ8TBE9 248 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 ST7LQ8TDW4 575 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 ZNRF4Q8WWF5 429 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 TAF15Q92804 592 aaKnown RBP eCLIP9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 MEGF10Q96KG7 1140 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 C1orf147Q96MC9 270 aaPredicted RBP9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 ZNF48Q96MX3 618 aaPredicted RBP9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 DUX5Q96PT3 197 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 PNRC2Q9NPJ4 139 aaKnown RBP9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 RPRD1BQ9NQG5 326 aaKnown RBP9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 MRPL22Q9NWU5 206 aaKnown RBP9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 ZNF69Q9UC07 566 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 CD300AQ9UGN4 299 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 SAMD4AQ9UPU9 718 aaKnown RBP9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 AURKCQ9UQB9 309 aa9.42□□□□□ -0.9
PCYT1A-215ENST00000488235 PPIAL4EA0A075B759 164 aa9.41□□□□□ -0.9
PCYT1A-215ENST00000488235 PPIAL4CA0A0B4J2A2 164 aa9.41□□□□□ -0.9
PCYT1A-215ENST00000488235 A8MXK9 166 aa9.41□□□□□ -0.9
PCYT1A-215ENST00000488235 PPIAL4DF5H284 164 aa9.41□□□□□ -0.9
PCYT1A-215ENST00000488235 F5H5P2 479 aa9.41□□□□□ -0.9
PCYT1A-215ENST00000488235 NDUFAB1O14561 156 aa9.41□□□□□ -0.9
PCYT1A-215ENST00000488235 ARPC2O15144 300 aa9.41□□□□□ -0.9
PCYT1A-215ENST00000488235 FOXH1O75593 365 aa9.41□□□□□ -0.9
PCYT1A-215ENST00000488235 GADD45GO95257 159 aa9.41□□□□□ -0.9
PCYT1A-215ENST00000488235 HLA-DPB1P04440 258 aa9.41□□□□□ -0.9
PCYT1A-215ENST00000488235 PPIAL4FP0DN26 164 aa9.41□□□□□ -0.9
PCYT1A-215ENST00000488235 HSD17B1P14061 328 aa9.41□□□□□ -0.9
PCYT1A-215ENST00000488235 ZNF12P17014 697 aa9.41□□□□□ -0.9
PCYT1A-215ENST00000488235 FPR3P25089 353 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms