RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 RGS7BPQ6MZT1 257 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-219ENST00000488186 PAMR1Q6UXH9 720 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 SPATC1Q76KD6 591 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 CDH24Q86UP0 819 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-219ENST00000488186 PAQR4Q8N4S7 273 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-219ENST00000488186 SETD9Q8NE22 299 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 OR1J1Q8NGS3 322 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 ABHD4Q8TB40 342 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 IPCEF1Q8WWN9 437 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-219ENST00000488186 SLC7A6Q92536 515 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 PIGTQ969N2 578 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 MAP6Q96JE9 813 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 DCLRE1CQ96SD1 692 aaKnown RBP13.59□□□□□ -0.23
C9orf3-219ENST00000488186 YIPF3Q9GZM5 350 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.59□□□□□ -0.23
C9orf3-219ENST00000488186 PLEKHA6Q9Y2H5 1048 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 TMEM14AQ9Y6G1 99 aa13.59□□□□□ -0.23
C9orf3-219ENST00000488186 DSCAMO60469 2012 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 CCDC182A6NF36 153 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 ENTPD6O75354 484 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 OR4A8P0C604 315 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 HSD11B1P28845 292 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 CAPGP40121 348 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 RGS6P49758 472 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 POU4F2Q12837 409 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 TMED1Q13445 227 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 OCLNQ16625 522 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 PCK2Q16822 640 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 C1orf174Q8IYL3 243 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 ENTHD1Q8IYW4 607 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 OR51G2Q8NGK0 314 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 OR5L1Q8NGL2 311 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 OTOSQ8NHW6 89 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 MBD6Q96DN6 1003 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 ABHD6Q9BV23 337 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 ADI1Q9BV57 179 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 PLK3Q9H4B4 646 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 CXorf56Q9H5V9 222 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 ZNF442Q9H7R0 627 aa13.58□□□□□ -0.24
C9orf3-219ENST00000488186 ZNF878C9JN71 531 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 DLGAP1O14490 977 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 GPRIN2O60269 458 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 DBHP09172 617 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 H2BFMP0C1H6 154 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 GCH1P30793 250 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 SLC6A9P48067 706 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 HCCSP53701 268 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 GRB2P62993 217 aaKnown RBP13.57□□□□□ -0.24
C9orf3-219ENST00000488186 NKX6-1P78426 367 aaPredicted RBP13.57□□□□□ -0.24
C9orf3-219ENST00000488186 GGTLC2Q14390 218 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 ZNF718Q3SXZ3 478 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 SLC25A30Q5SVS4 291 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 KCTD18Q6PI47 426 aaPredicted RBP13.57□□□□□ -0.24
C9orf3-219ENST00000488186 SLC35F2Q8IXU6 374 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 RHOXF1Q8NHV9 184 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 NRG4Q8WWG1 115 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 COG8Q96MW5 612 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 CBLN4Q9NTU7 201 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 HAO2Q9NYQ3 351 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 DUSP13Q9UII6 198 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 FZR1Q9UM11 496 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 PMF1-BGLAPU3KQ54 211 aa13.57□□□□□ -0.24
C9orf3-219ENST00000488186 B9A039 149 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 E9PQ18 207 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 ZNF670-ZNF695F2Z2N8 137 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 H0YAE9 185 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 PHYHO14832 338 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 SMPD2O60906 423 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 CLIC3O95833 236 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 APOC1P02654 83 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 LCATP04180 440 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 SOD3P08294 240 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 DANCRP0C864 163 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 WNT5AP41221 380 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 MTNR1AP48039 350 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 PRKXP51817 358 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 SNRPD2P62316 118 aaKnown RBP13.56□□□□□ -0.24
C9orf3-219ENST00000488186 IL18R1Q13478 541 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 ADIPOQQ15848 244 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 ZNF691Q5VV52 312 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 KRT77Q7Z794 578 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 C8orf59Q8N0T1 100 aaPredicted RBP13.56□□□□□ -0.24
C9orf3-219ENST00000488186 ZNF283Q8N7M2 679 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 SYNPRQ8TBG9 265 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 ST7LQ8TDW4 575 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 ASB17Q8WXJ9 295 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 MNTQ99583 582 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 KCNJ15Q99712 375 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 PNRC2Q9NPJ4 139 aaKnown RBP13.56□□□□□ -0.24
C9orf3-219ENST00000488186 TBCCD1Q9NVR7 557 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 AASSQ9UDR5 926 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 GPR160Q9UJ42 338 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 N6AMT1Q9Y5N5 214 aa13.56□□□□□ -0.24
C9orf3-219ENST00000488186 ARID1AO14497 2285 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 A0A1W2PPW3 197 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 H0YJX3 145 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 M0R135 149 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 ATE1O95260 518 aa13.55□□□□□ -0.24
C9orf3-219ENST00000488186 NGFP01138 241 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms