RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 COG8Q96MW5 612 aa17.39■□□□□ 0.37
HDAC4-209ENST00000487617 DCLRE1CQ96SD1 692 aaKnown RBP17.39■□□□□ 0.37
HDAC4-209ENST00000487617 COQ7Q99807 217 aa17.39■□□□□ 0.37
HDAC4-209ENST00000487617 CDADC1Q9BWV3 514 aa17.39■□□□□ 0.37
HDAC4-209ENST00000487617 TSSK6Q9BXA6 273 aa17.39■□□□□ 0.37
HDAC4-209ENST00000487617 DGCR6LQ9BY27 220 aa17.39■□□□□ 0.37
HDAC4-209ENST00000487617 MSL2Q9HCI7 577 aa17.39■□□□□ 0.37
HDAC4-209ENST00000487617 PURGQ9UJV8 347 aaKnown RBP17.39■□□□□ 0.37
HDAC4-209ENST00000487617 SOX14O95416 240 aa17.38■□□□□ 0.37
HDAC4-209ENST00000487617 CST1P01037 141 aa17.38■□□□□ 0.37
HDAC4-209ENST00000487617 PYCR1P32322 319 aa17.38■□□□□ 0.37
HDAC4-209ENST00000487617 OR10G2Q8NGC3 310 aa17.38■□□□□ 0.37
HDAC4-209ENST00000487617 OR2AJ1Q8NGZ0 328 aa17.38■□□□□ 0.37
HDAC4-209ENST00000487617 CLDND2Q8NHS1 167 aa17.38■□□□□ 0.37
HDAC4-209ENST00000487617 CANT1Q8WVQ1 401 aa17.38■□□□□ 0.37
HDAC4-209ENST00000487617 EGLN1Q9GZT9 426 aa17.38■□□□□ 0.37
HDAC4-209ENST00000487617 KLHL21Q9UJP4 597 aa17.38■□□□□ 0.37
HDAC4-209ENST00000487617 ZDHHC8Q9ULC8 765 aa17.38■□□□□ 0.37
HDAC4-209ENST00000487617 DHRS12A0PJE2 317 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 WNT9BO14905 357 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 IFNA2P01563 188 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 FAM157CP0CG43 387 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 RGS6P49758 472 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 CDH15P55291 814 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 GK3PQ14409 553 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 HFEQ30201 348 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 SLC18B1Q6NT16 456 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 CFAP77Q6ZQR2 320 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 LNX2Q8N448 690 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 SLC37A3Q8NCC5 494 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 PROKR2Q8NFJ6 384 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 OR2T4Q8NH00 348 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 GIPC3Q8TF64 312 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 ELMOD3Q96FG2 381 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 DIRC2Q96SL1 478 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 DDOQ99489 341 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 PITX2Q99697 317 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 ARMC1Q9NVT9 282 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 TREM2Q9NZC2 230 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 BAIAP2Q9UQB8 552 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 CACNG2Q9Y698 323 aa17.37■□□□□ 0.37
HDAC4-209ENST00000487617 J3QW42 95 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 GNGT2O14610 69 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 ADH4P08319 380 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 ZNF823P16415 610 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 KITLGP21583 273 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 GGT2P36268 569 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 MVKQ03426 396 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 FLOT2Q14254 428 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 FAM120AOSQ5T036 256 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 ZNF362Q5T0B9 420 aaPredicted RBP17.36■□□□□ 0.37
HDAC4-209ENST00000487617 AVPI1Q5T686 147 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 IL17RELQ6ZVW7 336 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 SPATA24Q86W54 205 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 OR2T33Q8NG76 320 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 OR5L1Q8NGL2 311 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 OR4Q3Q8NH05 313 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 PTP4A1Q93096 173 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 APOBEC3DQ96AK3 386 aaPredicted RBP17.36■□□□□ 0.37
HDAC4-209ENST00000487617 SLC7A6OSQ96CW6 309 aaPredicted RBP17.36■□□□□ 0.37
HDAC4-209ENST00000487617 HAVCR1Q96D42 359 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 C1orf159Q96HA4 380 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 NIPSNAP1Q9BPW8 284 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 MRPL22Q9NWU5 206 aaKnown RBP17.36■□□□□ 0.37
HDAC4-209ENST00000487617 PTTG3PQ9NZH4 202 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 CYB5R1Q9UHQ9 305 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 KCNG2Q9UJ96 466 aa17.36■□□□□ 0.37
HDAC4-209ENST00000487617 CLDN25C9JDP6 229 aa17.35■□□□□ 0.37
HDAC4-209ENST00000487617 HOXB6P17509 224 aaKnown RBP17.35■□□□□ 0.37
HDAC4-209ENST00000487617 HNF1AP20823 631 aa17.35■□□□□ 0.37
HDAC4-209ENST00000487617 TNFAIP6P98066 277 aaPredicted RBP17.35■□□□□ 0.37
HDAC4-209ENST00000487617 CDK5R2Q13319 367 aa17.35■□□□□ 0.37
HDAC4-209ENST00000487617 OR51L1Q8NGJ5 315 aa17.35■□□□□ 0.37
HDAC4-209ENST00000487617 OR9Q1Q8NGQ5 310 aa17.35■□□□□ 0.37
HDAC4-209ENST00000487617 CCL17Q92583 94 aa17.35■□□□□ 0.37
HDAC4-209ENST00000487617 FEVQ99581 238 aa17.35■□□□□ 0.37
HDAC4-209ENST00000487617 MALRD1Q5VYJ5 2156 aa17.35■□□□□ 0.37
HDAC4-209ENST00000487617 TVP23AA6NH52 213 aa17.34■□□□□ 0.37
HDAC4-209ENST00000487617 B4DSR2 109 aa17.34■□□□□ 0.37
HDAC4-209ENST00000487617 F5H5K5 113 aa17.34■□□□□ 0.37
HDAC4-209ENST00000487617 DNAJC8O75937 253 aaPredicted RBP17.34■□□□□ 0.37
HDAC4-209ENST00000487617 IFNGP01579 166 aa17.34■□□□□ 0.37
HDAC4-209ENST00000487617 CD55P08174 381 aa17.34■□□□□ 0.37
HDAC4-209ENST00000487617 RAC2P15153 192 aa17.34■□□□□ 0.37
HDAC4-209ENST00000487617 TNFSF4P23510 183 aa17.34■□□□□ 0.37
HDAC4-209ENST00000487617 ERFP50548 548 aa17.34■□□□□ 0.37
HDAC4-209ENST00000487617 ECH1Q13011 328 aa17.34■□□□□ 0.37
HDAC4-209ENST00000487617 CRMP1Q14194 572 aa17.34■□□□□ 0.37
HDAC4-209ENST00000487617 HLXQ14774 488 aaPredicted RBP17.34■□□□□ 0.37
HDAC4-209ENST00000487617 CR1LQ2VPA4 569 aa17.34■□□□□ 0.37
HDAC4-209ENST00000487617 CD300LDQ6UXZ3 194 aa17.34■□□□□ 0.37
HDAC4-209ENST00000487617 OR2Z1Q8NG97 314 aa17.34■□□□□ 0.37
HDAC4-209ENST00000487617 TEX47Q8TBZ9 253 aa17.34■□□□□ 0.37
HDAC4-209ENST00000487617 ZNRF4Q8WWF5 429 aa17.34■□□□□ 0.37
HDAC4-209ENST00000487617 TIMD4Q96H15 378 aa17.34■□□□□ 0.37
HDAC4-209ENST00000487617 ATF6BQ99941 703 aa17.34■□□□□ 0.37
HDAC4-209ENST00000487617 WIPI2Q9Y4P8 454 aa17.34■□□□□ 0.37
HDAC4-209ENST00000487617 ANK3Q12955 4377 aaKnown RBP17.34■□□□□ 0.37
HDAC4-209ENST00000487617 ARRDC5A6NEK1 342 aa17.33■□□□□ 0.36
HDAC4-209ENST00000487617 SRD5A1P18405 259 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms