RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 C9orf135Q5VTT2 229 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 C9orf40Q8IXQ3 194 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 FAM109AQ8N4B1 249 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 DEFB123Q8N688 67 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 ZCCHC4Q9H5U6 513 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 SLC5A6Q9Y289 635 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 NOSIPQ9Y314 301 aaKnown RBP10.62□□□□□ -0.71
TRA2B-214ENST00000487615 SIX6O95475 246 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 RECKO95980 971 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 APOC3P02656 99 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 SLC6A1P30531 599 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 CLDN6P56747 220 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 ELP2Q6IA86 826 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 GTPBP8Q8N3Z3 284 aaPredicted RBP10.62□□□□□ -0.71
TRA2B-214ENST00000487615 ABCA7Q8IZY2 2146 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 TANC1Q9C0D5 1861 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 SULT1C2O00338 296 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 SGCEO43556 437 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 CD3DP04234 171 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 APLNRP35414 380 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 RFX2P48378 723 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 FAM199XQ6PEV8 388 aaPredicted RBP10.62□□□□□ -0.71
TRA2B-214ENST00000487615 DEGS2Q6QHC5 323 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 MAMSTRQ6ZN01 415 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 ZNF813Q6ZN06 617 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 MOB3CQ70IA8 216 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 RAB11FIP2Q7L804 512 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 NOXO1Q8NFA2 376 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 CPT1CQ8TCG5 803 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 ZNF721Q8TF20 911 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 PIGTQ969N2 578 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 CMSS1Q9BQ75 279 aaKnown RBP10.62□□□□□ -0.71
TRA2B-214ENST00000487615 FBXL2Q9UKC9 423 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 UBE2J1Q9Y385 318 aaPredicted RBP10.62□□□□□ -0.71
TRA2B-214ENST00000487615 SF3B6Q9Y3B4 125 aaKnown RBP10.62□□□□□ -0.71
TRA2B-214ENST00000487615 HRH3Q9Y5N1 445 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 ARID1AO14497 2285 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 PPP3CBP16298 524 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 ADH6P28332 368 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 LTBRP36941 435 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 CCDC71LQ8N9Z2 235 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 OR4C16Q8NGL9 310 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 YIPF5Q969M3 257 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 SEC22AQ96IW7 307 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 SPACA5Q96QH8 159 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 RAB33BQ9H082 229 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 DUSP15Q9H1R2 295 aaPredicted RBP10.62□□□□□ -0.71
TRA2B-214ENST00000487615 BANF2Q9H503 90 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 PPP1R3EQ9H7J1 279 aa10.62□□□□□ -0.71
TRA2B-214ENST00000487615 GLSO94925 669 aaPredicted RBP10.61□□□□□ -0.71
TRA2B-214ENST00000487615 RAG2P55895 527 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 SCAND1P57086 179 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 SLC9A3R2Q15599 337 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 BCL2A1Q16548 175 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 LINC00303Q3SY05 128 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 ARSKQ6UWY0 536 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 UNQ6126/PRO20091Q6UXV3 157 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 LINC00696Q6ZRV3 163 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 CDC20BQ86Y33 519 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 FNDC9Q8TBE3 224 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 RADILQ96JH8 1075 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 TMEM74BQ9NUR3 256 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 PIGLQ9Y2B2 252 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 A0A0A6YYH2 397 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 A6NJ64 397 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 THY1P04216 161 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 PTHLHP12272 177 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 S100A11P31949 105 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 TRA2AQ13595 282 aaKnown RBP eCLIP10.61□□□□□ -0.713e-10■■■■■ 35.2
TRA2B-214ENST00000487615 FAM76BQ5HYJ3 339 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 ALKAL2Q6UX46 152 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 ADGRG3Q86Y34 549 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 STOML3Q8TAV4 291 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 ZC3HAV1LQ96H79 300 aaKnown RBP10.61□□□□□ -0.71
TRA2B-214ENST00000487615 ST6GAL2Q96JF0 529 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 CDH20Q9HBT6 801 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 TAS2R5Q9NYW4 299 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 ST6GALNAC2Q9UJ37 374 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 A0A0D9SG52 128 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 SNRPGP15A8MWD9 76 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 KLF4O43474 513 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 CD46P15529 392 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 PTGS2P35354 604 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 ECH1Q13011 328 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 GGTLC2Q14390 218 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 RFPL4BQ6ZWI9 263 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 ARL5BQ96KC2 179 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 POFUT1Q9H488 388 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 ZFP57Q9NU63 452 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 FRRS1LQ9P0K9 344 aa10.61□□□□□ -0.71
TRA2B-214ENST00000487615 TMEM265A0A087WTH1 108 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 STMND1H3BQB6 276 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 M0R135 149 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 ZNF780AO75290 641 aaPredicted RBP10.6□□□□□ -0.71
TRA2B-214ENST00000487615 CBR3O75828 277 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 DBHP09172 617 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 ZNF16P17020 682 aaPredicted RBP10.6□□□□□ -0.71
TRA2B-214ENST00000487615 AKR1D1P51857 326 aa10.6□□□□□ -0.71
TRA2B-214ENST00000487615 SSBP1Q04837 148 aaKnown RBP10.6□□□□□ -0.71
TRA2B-214ENST00000487615 OGFOD3Q6PK18 319 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms