RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-218	ENST00000487565	SLC18B1	Q6NT16	456 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	ZNF474	Q6S9Z5	364 aa	Predicted RBP	6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	ZNF627	Q7L945	461 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	SLC16A14	Q7RTX9	510 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	DPPA2	Q7Z7J5	298 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	LIX1L	Q8IVB5	337 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	LINC00346	Q8IVM7	164 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	SLC22A24	Q8N4F4	322 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	ZNF433	Q8N7K0	673 aa	Predicted RBP	6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	STEAP2	Q8NFT2	490 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	OR4F15	Q8NGB8	312 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	OR52I1	Q8NGK6	324 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	CA5BP1	Q8WTZ4	195 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	MRPL48	Q96GC5	212 aa	Known RBP	6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	MNT	Q99583	582 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	TBX5	Q99593	518 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	KCNJ15	Q99712	375 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	SH3GL3	Q99963	347 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	ZNF416	Q9BWM5	594 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	YTHDF1	Q9BYJ9	559 aa	Known RBP	6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	INPP5E	Q9NRR6	644 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	ELOVL5	Q9NYP7	299 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	LAMP5	Q9UJQ1	280 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	DIMT1	Q9UNQ2	313 aa	Known RBP	6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	EXOSC1	Q9Y3B2	195 aa	Known RBP	6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	TMEM14A	Q9Y6G1	99 aa		6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	UBR5	O95071	2799 aa	Predicted RBP	6.69	□□□□□ -1.34
GARNL3-218	ENST00000487565	DAPL1	A0PJW8	107 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565		A8MXE2	369 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	PTGES3L	E9PB15	166 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	ZNF593	O00488	134 aa	Predicted RBP	6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	MYL12B	O14950	172 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	DOK2	O60496	412 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	ZG16	O60844	167 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	UBL3	O95164	117 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	CDK1	P06493	297 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	LYN	P07948	512 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	OR2T7	P0C7T2	308 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	CD79A	P11912	226 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	PSMB1	P20618	241 aa	Known RBP	6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	DCK	P27707	260 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	CCKAR	P32238	428 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	RPS27	P42677	84 aa	Known RBP	6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	ACTA2	P62736	377 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	ACTG2	P63267	376 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	TUBA1B	P68363	451 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	TUBA4A	P68366	448 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	SLC35A2	P78381	396 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	ST3GAL4	Q11206	333 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	ENDOG	Q14249	297 aa	Known RBP	6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	TSC22D1	Q15714	1073 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	TEX30	Q5JUR7	227 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	FAM27B	Q5VT28	67 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	OR7E24	Q6IFN5	339 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	TMEM53	Q6P2H8	277 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	ZNF773	Q6PK81	442 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	STAC2	Q6ZMT1	411 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	TUBA1A	Q71U36	451 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	SPATC1	Q76KD6	591 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	DPY19L4	Q7Z388	723 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	FAM220A	Q7Z4H9	259 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	CDC20B	Q86Y33	519 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	CCDC36	Q8IYA8	594 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	LRRC18	Q8N456	261 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	ZNF808	Q8N4W9	903 aa	Predicted RBP	6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	RFLNB	Q8N5W9	214 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	ACBD7	Q8N6N7	88 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	OR2T27	Q8NH04	317 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	OR52N5	Q8NH56	324 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	OTOS	Q8NHW6	89 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	ASB17	Q8WXJ9	295 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	GGH	Q92820	318 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	BCL2L2	Q92843	193 aa	Predicted RBP	6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	RNASE6	Q93091	150 aa	Known RBP	6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	TMEM80	Q96HE8	168 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	MYCBP	Q99417	103 aa	Predicted RBP	6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	TTTY10	Q9BZA0	68 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	ACTR6	Q9GZN1	396 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	CCDC90B	Q9GZT6	254 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	ZNF696	Q9H7X3	374 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	RNF121	Q9H920	327 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	FGF20	Q9NP95	211 aa	Predicted RBP	6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	OBP2B	Q9NPH6	170 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	MRPS18A	Q9NVS2	196 aa	Known RBP	6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	FKBP14	Q9NWM8	211 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	CHCHD3	Q9NX63	227 aa	Known RBP	6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	JKAMP	Q9P055	326 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	IKZF2	Q9UKS7	526 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	EXOG	Q9Y2C4	368 aa	Known RBP	6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	KLHDC2	Q9Y2U9	406 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	AMDHD2	Q9Y303	409 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	SNX5	Q9Y5X3	404 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	LHFPL6	Q9Y693	200 aa		6.68	□□□□□ -1.34
GARNL3-218	ENST00000487565	ZGRF1	Q86YA3	2104 aa		6.67	□□□□□ -1.34
GARNL3-218	ENST00000487565	DOPEY1	Q5JWR5	2465 aa		6.67	□□□□□ -1.34
GARNL3-218	ENST00000487565	LRRK2	Q5S007	2527 aa		6.67	□□□□□ -1.34
GARNL3-218	ENST00000487565	ARPC4-TTLL3	A0A0A6YYG9	625 aa		6.67	□□□□□ -1.34
GARNL3-218	ENST00000487565		A0A1W2PQL4	384 aa	Predicted RBP	6.67	□□□□□ -1.34
GARNL3-218	ENST00000487565	NKX2-6	A6NCS4	301 aa		6.67	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms