RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 CRYABP02511 175 aaKnown RBP6.21□□□□□ -1.42
SF3A3-206ENST00000487062 ISG15P05161 165 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 TNFSF8P32971 234 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 SOX2P48431 317 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 UCNP55089 124 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 CAV3P56539 151 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 HIST1H3AP68431 136 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 MFGE8Q08431 387 aaPredicted RBP6.21□□□□□ -1.42
SF3A3-206ENST00000487062 SCRN3Q0VDG4 424 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 ECH1Q13011 328 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 ENDOGQ14249 297 aaKnown RBP6.21□□□□□ -1.42
SF3A3-206ENST00000487062 CEACAM16Q2WEN9 425 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 NRN1LQ496H8 165 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 ARSJQ5FYB0 599 aaPredicted RBP6.21□□□□□ -1.42
SF3A3-206ENST00000487062 ELFN2Q5R3F8 820 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 IDNKQ5T6J7 187 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 FAM27D1Q5T7N8 215 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 HIST2H3PS2Q5TEC6 136 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 SFXN4Q6P4A7 337 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 CFAP77Q6ZQR2 320 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 Q6ZS92 163 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 HIST2H3AQ71DI3 136 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 SYT9Q86SS6 491 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 CCDC190Q86UF4 302 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 TUSC5Q8IXB3 177 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 ZNF100Q8IYN0 542 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 ZNF283Q8N7M2 679 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 IL17RDQ8NFM7 739 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 RGP1Q92546 391 aaPredicted RBP6.21□□□□□ -1.42
SF3A3-206ENST00000487062 NABP1Q96AH0 204 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 APH1AQ96BI3 265 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 ALKBH3Q96Q83 286 aaPredicted RBP6.21□□□□□ -1.42
SF3A3-206ENST00000487062 KCNJ15Q99712 375 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 FOXB1Q99853 325 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 ATF6BQ99941 703 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 MRI1Q9BV20 369 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 PRDM14Q9GZV8 571 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 CALHM2Q9HA72 323 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 ABCB9Q9NP78 766 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 BRD7Q9NPI1 651 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 ABRACLQ9P1F3 81 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 COMMD3Q9UBI1 195 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 FBXL3Q9UKT7 428 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 WASF3Q9UPY6 502 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 SLC22A13Q9Y226 551 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 DMXL1Q9Y485 3027 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 CFAP54Q96N23 3096 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 DNAJC13O75165 2243 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 ZNF407Q9C0G0 2248 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 TRBV5-7A0A0A0MS05 114 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 A0A1B0GTH9 108 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 A0A1B0GVI7 797 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 LOC107986453A0A1B0GWG9 222 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 OR14I1A6ND48 311 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 ANXA2P2A6NMY6 339 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 RPL36A-HNRNPH2H7BZ11 118 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 K7ENP7 123 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 RER1O15258 196 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 TPD52L2O43399 206 aaKnown RBP6.2□□□□□ -1.42
SF3A3-206ENST00000487062 WNT11O96014 354 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 ANXA2P07355 339 aaKnown RBP6.2□□□□□ -1.42
SF3A3-206ENST00000487062 ZNF12P17014 697 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 CTSSP25774 331 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 PTBP1P26599 531 aaKnown RBP eCLIP6.2□□□□□ -1.42
SF3A3-206ENST00000487062 APEX1P27695 318 aaKnown RBP6.2□□□□□ -1.42
SF3A3-206ENST00000487062 RANBP1P43487 201 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 CX3CR1P49238 355 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 PRKXP51817 358 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 RAB35Q15286 201 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 C3AR1Q16581 482 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 ODF4Q2M2E3 257 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 ZNF181Q2M3W8 571 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 TSPO2Q5TGU0 170 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 INO80CQ6PI98 192 aaPredicted RBP6.2□□□□□ -1.42
SF3A3-206ENST00000487062 METAP1DQ6UB28 335 aaPredicted RBP6.2□□□□□ -1.42
SF3A3-206ENST00000487062 FAM131AQ6UXB0 335 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 STAC2Q6ZMT1 411 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 ZNF813Q6ZN06 617 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 SLC16A14Q7RTX9 510 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 LUZP2Q86TE4 346 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 LAX1Q8IWV1 398 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 ELMOD2Q8IZ81 293 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 LRRC18Q8N456 261 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 SLC22A24Q8N4F4 322 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 PARP16Q8N5Y8 322 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 ZNF433Q8N7K0 673 aaPredicted RBP6.2□□□□□ -1.42
SF3A3-206ENST00000487062 CCDC54Q8NEL0 328 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 OR10S1Q8NGN2 331 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 OR13C3Q8NGS6 347 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 SPTSSAQ969W0 71 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 TMEM106AQ96A25 262 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 DIRAS2Q96HU8 199 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 GMPPAQ96IJ6 420 aaPredicted RBP6.2□□□□□ -1.42
SF3A3-206ENST00000487062 PBOV1Q9GZY1 135 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 HDHD2Q9H0R4 259 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 PPIL3Q9H2H8 161 aaKnown RBP6.2□□□□□ -1.42
SF3A3-206ENST00000487062 ZCCHC4Q9H5U6 513 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 SP140LQ9H930 580 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 G6PC2Q9NQR9 355 aa6.2□□□□□ -1.42
SF3A3-206ENST00000487062 DDX28Q9NUL7 540 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms