RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 GORASP2Q9H8Y8 452 aa20.69■□□□□ 0.9
LIME1-206ENST00000487026 MMP26Q9NRE1 261 aa20.69■□□□□ 0.9
LIME1-206ENST00000487026 IL19Q9UHD0 177 aa20.69■□□□□ 0.9
LIME1-206ENST00000487026 B9D1Q9UPM9 204 aa20.69■□□□□ 0.9
LIME1-206ENST00000487026 PPP1R3CQ9UQK1 317 aa20.69■□□□□ 0.9
LIME1-206ENST00000487026 GADD45GO95257 159 aa20.68■□□□□ 0.9
LIME1-206ENST00000487026 SEMG1P04279 462 aa20.68■□□□□ 0.9
LIME1-206ENST00000487026 RAC2P15153 192 aa20.68■□□□□ 0.9
LIME1-206ENST00000487026 GATA3P23771 443 aa20.68■□□□□ 0.9
LIME1-206ENST00000487026 SEC61A1P61619 476 aaKnown RBP20.68■□□□□ 0.9
LIME1-206ENST00000487026 ACTG1P63261 375 aa20.68■□□□□ 0.9
LIME1-206ENST00000487026 SPIBQ01892 262 aa20.68■□□□□ 0.9
LIME1-206ENST00000487026 ZMYND11Q15326 602 aa20.68■□□□□ 0.9
LIME1-206ENST00000487026 RFX4Q33E94 735 aa20.68■□□□□ 0.9
LIME1-206ENST00000487026 LEG1Q6P5S2 330 aa20.68■□□□□ 0.9
LIME1-206ENST00000487026 USP43Q70EL4 1123 aa20.68■□□□□ 0.9
LIME1-206ENST00000487026 GJC3Q8NFK1 279 aa20.68■□□□□ 0.9
LIME1-206ENST00000487026 FANK1Q8TC84 345 aa20.68■□□□□ 0.9
LIME1-206ENST00000487026 SIGLEC11Q96RL6 698 aa20.68■□□□□ 0.9
LIME1-206ENST00000487026 NMNAT3Q96T66 252 aa20.68■□□□□ 0.9
LIME1-206ENST00000487026 OR52D1Q9H346 318 aa20.68■□□□□ 0.9
LIME1-206ENST00000487026 IGLV1-36A0A0B4J1U3 117 aa20.67■□□□□ 0.9
LIME1-206ENST00000487026 FOXH1O75593 365 aa20.67■□□□□ 0.9
LIME1-206ENST00000487026 CRABP1P29762 137 aa20.67■□□□□ 0.9
LIME1-206ENST00000487026 HIST1H3AP68431 136 aa20.67■□□□□ 0.9
LIME1-206ENST00000487026 HIST2H3PS2Q5TEC6 136 aa20.67■□□□□ 0.9
LIME1-206ENST00000487026 HIST2H3AQ71DI3 136 aa20.67■□□□□ 0.9
LIME1-206ENST00000487026 LRRC28Q86X40 367 aaPredicted RBP20.67■□□□□ 0.9
LIME1-206ENST00000487026 OR6V1Q8N148 313 aa20.67■□□□□ 0.9
LIME1-206ENST00000487026 KLHL36Q8N4N3 616 aa20.67■□□□□ 0.9
LIME1-206ENST00000487026 OR10AD1Q8NGE0 317 aa20.67■□□□□ 0.9
LIME1-206ENST00000487026 OR4K13Q8NH42 304 aa20.67■□□□□ 0.9
LIME1-206ENST00000487026 WDR76Q9H967 626 aa20.67■□□□□ 0.9
LIME1-206ENST00000487026 PATZ1Q9HBE1 687 aaKnown RBP20.67■□□□□ 0.9
LIME1-206ENST00000487026 IGHV3-64DA0A0J9YX35 117 aa20.66■□□□□ 0.9
LIME1-206ENST00000487026 H0YL77 283 aa20.66■□□□□ 0.9
LIME1-206ENST00000487026 TRAPPC2LH3BP13 241 aa20.66■□□□□ 0.9
LIME1-206ENST00000487026 SURF4O15260 269 aa20.66■□□□□ 0.9
LIME1-206ENST00000487026 SNX3O60493 162 aa20.66■□□□□ 0.9
LIME1-206ENST00000487026 HIST1H1CP16403 213 aaKnown RBP20.66■□□□□ 0.9
LIME1-206ENST00000487026 CFPP27918 469 aa20.66■□□□□ 0.9
LIME1-206ENST00000487026 RGS6P49758 472 aa20.66■□□□□ 0.9
LIME1-206ENST00000487026 BTG1P62324 171 aa20.66■□□□□ 0.9
LIME1-206ENST00000487026 RSPO1Q2MKA7 263 aaPredicted RBP20.66■□□□□ 0.9
LIME1-206ENST00000487026 DNM1P34Q6PK57 102 aa20.66■□□□□ 0.9
LIME1-206ENST00000487026 JAZF1Q86VZ6 243 aa20.66■□□□□ 0.9
LIME1-206ENST00000487026 LINC00346Q8IVM7 164 aa20.66■□□□□ 0.9
LIME1-206ENST00000487026 BPIFB2Q8N4F0 458 aa20.66■□□□□ 0.9
LIME1-206ENST00000487026 SPICQ8N5J4 248 aa20.66■□□□□ 0.9
LIME1-206ENST00000487026 OR5L1Q8NGL2 311 aa20.66■□□□□ 0.9
LIME1-206ENST00000487026 IFT27Q9BW83 186 aa20.66■□□□□ 0.9
LIME1-206ENST00000487026 SUCNR1Q9BXA5 334 aa20.66■□□□□ 0.9
LIME1-206ENST00000487026 GCM1Q9NP62 436 aa20.66■□□□□ 0.9
LIME1-206ENST00000487026 TRIM77I1YAP6 450 aa20.65■□□□□ 0.9
LIME1-206ENST00000487026 OR10H3O60404 316 aa20.65■□□□□ 0.9
LIME1-206ENST00000487026 ZNF205O95201 554 aa20.65■□□□□ 0.9
LIME1-206ENST00000487026 FSHBP01225 129 aa20.65■□□□□ 0.9
LIME1-206ENST00000487026 SLC6A6P31641 620 aa20.65■□□□□ 0.9
LIME1-206ENST00000487026 PRSS12P56730 875 aa20.65■□□□□ 0.9
LIME1-206ENST00000487026 SMIM11AP58511 58 aa20.65■□□□□ 0.9
LIME1-206ENST00000487026 TMEM155Q4W5P6 130 aa20.65■□□□□ 0.9
LIME1-206ENST00000487026 FBXW12Q6X9E4 464 aa20.65■□□□□ 0.9
LIME1-206ENST00000487026 CPLX4Q7Z7G2 160 aa20.65■□□□□ 0.9
LIME1-206ENST00000487026 DEFB108BQ8NET1 73 aa20.65■□□□□ 0.9
LIME1-206ENST00000487026 OR8G5Q8NG78 346 aa20.65■□□□□ 0.9
LIME1-206ENST00000487026 ZNF420Q8TAQ5 688 aaPredicted RBP20.65■□□□□ 0.9
LIME1-206ENST00000487026 FAM216AQ8WUB2 273 aa20.65■□□□□ 0.9
LIME1-206ENST00000487026 GCDHQ92947 438 aaPredicted RBP20.65■□□□□ 0.9
LIME1-206ENST00000487026 APOBEC3DQ96AK3 386 aaPredicted RBP20.65■□□□□ 0.9
LIME1-206ENST00000487026 CDRT15Q96T59 188 aa20.65■□□□□ 0.9
LIME1-206ENST00000487026 COQ7Q99807 217 aa20.65■□□□□ 0.9
LIME1-206ENST00000487026 FN3KQ9H479 309 aa20.65■□□□□ 0.9
LIME1-206ENST00000487026 ESM1Q9NQ30 184 aa20.65■□□□□ 0.9
LIME1-206ENST00000487026 RPRD1BQ9NQG5 326 aaKnown RBP20.65■□□□□ 0.9
LIME1-206ENST00000487026 ATPIF1Q9UII2 106 aa20.65■□□□□ 0.9
LIME1-206ENST00000487026 TMEM178BH3BS89 294 aa20.64■□□□□ 0.89
LIME1-206ENST00000487026 RENP00797 406 aa20.64■□□□□ 0.89
LIME1-206ENST00000487026 HSD17B1P14061 328 aa20.64■□□□□ 0.89
LIME1-206ENST00000487026 SLC6A9P48067 706 aa20.64■□□□□ 0.89
LIME1-206ENST00000487026 MMP16P51512 607 aa20.64■□□□□ 0.89
LIME1-206ENST00000487026 COX10Q12887 443 aa20.64■□□□□ 0.89
LIME1-206ENST00000487026 BHLHE23Q8NDY6 225 aa20.64■□□□□ 0.89
LIME1-206ENST00000487026 SLC26A10Q8NG04 563 aa20.64■□□□□ 0.89
LIME1-206ENST00000487026 MCUR1Q96AQ8 359 aa20.64■□□□□ 0.89
LIME1-206ENST00000487026 ZNF582Q96NG8 517 aaPredicted RBP20.64■□□□□ 0.89
LIME1-206ENST00000487026 HDHD2Q9H0R4 259 aa20.64■□□□□ 0.89
LIME1-206ENST00000487026 CD300AQ9UGN4 299 aa20.64■□□□□ 0.89
LIME1-206ENST00000487026 MAGEL2Q9UJ55 1249 aa20.64■□□□□ 0.89
LIME1-206ENST00000487026 PPIAL4EA0A075B759 164 aa20.63■□□□□ 0.89
LIME1-206ENST00000487026 PPIAL4CA0A0B4J2A2 164 aa20.63■□□□□ 0.89
LIME1-206ENST00000487026 PPIAL4DF5H284 164 aa20.63■□□□□ 0.89
LIME1-206ENST00000487026 J3QW42 95 aa20.63■□□□□ 0.89
LIME1-206ENST00000487026 ARPC2O15144 300 aa20.63■□□□□ 0.89
LIME1-206ENST00000487026 ARPC3O15145 178 aa20.63■□□□□ 0.89
LIME1-206ENST00000487026 PPIAL4FP0DN26 164 aa20.63■□□□□ 0.89
LIME1-206ENST00000487026 FPR3P25089 353 aa20.63■□□□□ 0.89
LIME1-206ENST00000487026 RRM2P31350 389 aa20.63■□□□□ 0.89
LIME1-206ENST00000487026 SLC35F1Q5T1Q4 408 aa20.63■□□□□ 0.89
LIME1-206ENST00000487026 PGM2L1Q6PCE3 622 aa20.63■□□□□ 0.89
LIME1-206ENST00000487026 CFAP77Q6ZQR2 320 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms