RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 NFYBP25208 207 aa14.95□□□□□ -0.02
COL7A1-210ENST00000487017 DCTDP32321 178 aa14.95□□□□□ -0.02
COL7A1-210ENST00000487017 OR8B8Q15620 311 aa14.95□□□□□ -0.02
COL7A1-210ENST00000487017 TMEM182Q6ZP80 229 aaPredicted RBP14.95□□□□□ -0.02
COL7A1-210ENST00000487017 TMED6Q8WW62 240 aa14.95□□□□□ -0.02
COL7A1-210ENST00000487017 EMG1Q92979 244 aaKnown RBP14.95□□□□□ -0.02
COL7A1-210ENST00000487017 PARP12Q9H0J9 701 aaKnown RBP14.95□□□□□ -0.02
COL7A1-210ENST00000487017 TXNIPQ9H3M7 391 aa14.95□□□□□ -0.02
COL7A1-210ENST00000487017 PRRC2BQ5JSZ5 2229 aaKnown RBP14.94□□□□□ -0.02
COL7A1-210ENST00000487017 ZFP92A6NM28 416 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 PPP1R2P9O14990 202 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 TMEM41BQ5BJD5 291 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 S100A7AQ86SG5 101 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 CCL4L1Q8NHW4 92 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 EDAQ92838 391 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 TEX101Q9BY14 249 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 KCNG2Q9UJ96 466 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 PLRG1O43660 514 aaKnown RBP14.94□□□□□ -0.02
COL7A1-210ENST00000487017 TBPP20226 339 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 SNRPNP63162 240 aaKnown RBP14.94□□□□□ -0.02
COL7A1-210ENST00000487017 SLC38A9Q8NBW4 561 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 NT5CQ8TCD5 201 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 ASB13Q8WXK3 278 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 ST8SIA1Q92185 356 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 RBM38Q9H0Z9 239 aaKnown RBP14.94□□□□□ -0.02
COL7A1-210ENST00000487017 ARV1Q9H2C2 271 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 SLC22A13Q9Y226 551 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 HRH3Q9Y5N1 445 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 GSTP1P09211 210 aaKnown RBP14.94□□□□□ -0.02
COL7A1-210ENST00000487017 RPS27P42677 84 aaKnown RBP14.94□□□□□ -0.02
COL7A1-210ENST00000487017 WNT3P56703 355 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 BATF2Q8N1L9 274 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 MFSD4AQ8N468 514 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 OR4Q3Q8NH05 313 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 OR10J5Q8NHC4 309 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 MITD1Q8WV92 249 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 CTSFQ9UBX1 484 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 H2AFB1P0C5Y9 115 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 EDDM3BP56851 147 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 FLI1Q01543 452 aaPredicted RBP14.94□□□□□ -0.02
COL7A1-210ENST00000487017 SSBP1Q04837 148 aaKnown RBP14.94□□□□□ -0.02
COL7A1-210ENST00000487017 KIAA0040Q15053 153 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 TRIM61Q5EBN2 209 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 MORN4Q8NDC4 146 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 DOK1Q99704 481 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 KCNJ15Q99712 375 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 KCNIP2Q9NS61 270 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 ANKRD10Q9NXR5 420 aa14.94□□□□□ -0.02
COL7A1-210ENST00000487017 SIPA1L3O60292 1781 aaPredicted RBP14.94□□□□□ -0.02
COL7A1-210ENST00000487017 TFAP2EQ6VUC0 442 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 OR52N5Q8NH56 324 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 NUDCD2Q8WVJ2 157 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 SIGLEC11Q96RL6 698 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 MMP17Q9ULZ9 603 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 NME2P1O60361 137 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 CEACAM5P06731 702 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 ADRA2CP18825 462 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 OPA3Q9H6K4 179 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 ZNF891A8MT65 544 aaPredicted RBP14.93□□□□□ -0.02
COL7A1-210ENST00000487017 BHLHE40O14503 412 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 DEGS1O15121 323 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 CTXN2P0C2S0 81 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 CYB561P49447 251 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 FAM27D1Q5T7N8 215 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 OR2G2Q8NGZ5 317 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 GPR84Q9NQS5 396 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 PRELID3BQ9Y3B1 194 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 MT-ND4LP03901 98 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 PPP2CBP62714 309 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 PPP2CAP67775 309 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 ARL16Q0P5N6 197 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 DERL3Q96Q80 235 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 SLCO1C1Q9NYB5 712 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 GUSBP08236 651 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 MGMTP16455 207 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 KIAA0141Q14154 515 aaPredicted RBP14.93□□□□□ -0.02
COL7A1-210ENST00000487017 TBC1D28Q2M2D7 210 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 ASTLQ6HA08 431 aaPredicted RBP14.93□□□□□ -0.02
COL7A1-210ENST00000487017 KIRREL2Q6UWL6 708 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 TSLPQ969D9 159 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 BARHL1Q9BZE3 327 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 FLVCR1Q9Y5Y0 555 aa14.93□□□□□ -0.02
COL7A1-210ENST00000487017 NHSQ6T4R5 1651 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 KCNE1BA0A087WTH5 132 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 EFSO43281 561 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 ZNF92Q03936 586 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 VWA2Q5GFL6 755 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 SSX9Q7RTT3 188 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 RELL2Q8NC24 303 aaPredicted RBP14.92□□□□□ -0.02
COL7A1-210ENST00000487017 OR4C16Q8NGL9 310 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 ORAI1Q96D31 301 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 LURAP1Q96LR2 239 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 OR2A14Q96R47 310 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 PBX4Q9BYU1 374 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 SIT1Q9Y3P8 196 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 KCNE3Q9Y6H6 103 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 XRCC3O43542 346 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 APOA2P02652 100 aa14.92□□□□□ -0.02
COL7A1-210ENST00000487017 FGF9P31371 208 aaPredicted RBP14.92□□□□□ -0.02
COL7A1-210ENST00000487017 FCGR2CP31995 323 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms