RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 SEMA6DQ8NFY4 1073 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 OR9Q2Q8NGE9 314 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 OR56A4Q8NGH8 313 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 RPLP0P6Q8NHW5 317 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 FAM45AQ8TCE6 357 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 TMEM174Q8WUU8 243 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 BAALCQ8WXS3 180 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 RPEQ96AT9 228 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 EME1Q96AY2 570 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 UPRTQ96BW1 309 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 SMIM12Q96EX1 92 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 SFRP2Q96HF1 295 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 TXNDC15Q96J42 360 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 PPP1R2P1Q96PQ5 205 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 SDHCQ99643 169 aaPredicted RBP4.85□□□□□ -1.63
SF1-217ENST00000486960 C2orf88Q9BSF0 95 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 SLC19A3Q9BZV2 496 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 YIPF3Q9GZM5 350 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 NAA50Q9GZZ1 169 aaKnown RBP4.85□□□□□ -1.63
SF1-217ENST00000486960 KLHL31Q9H511 634 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 ARMC7Q9H6L4 198 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 TMBIM4Q9HC24 238 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 TMEM138Q9NPI0 162 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 SLC52A3Q9NQ40 469 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 IFT46Q9NQC8 304 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 SPANXB1Q9NS25 103 aaPredicted RBP4.85□□□□□ -1.63
SF1-217ENST00000486960 VAPAQ9P0L0 249 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 KCNG2Q9UJ96 466 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 ZNF391Q9UJN7 358 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 PURGQ9UJV8 347 aaKnown RBP4.85□□□□□ -1.63
SF1-217ENST00000486960 WDR83OSQ9Y284 106 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 OR51B4Q9Y5P0 310 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 PTPRJQ12913 1337 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 DENND4CQ5VZ89 1909 aa4.85□□□□□ -1.63
SF1-217ENST00000486960 hCG_38984A0A1B0GV85 526 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 PRSS51A0A1B0GVH4 220 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 OTOL1A6NHN0 477 aaPredicted RBP4.84□□□□□ -1.63
SF1-217ENST00000486960 RNF212BA8MTL3 300 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 C17orf105B2RV13 164 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 E5RGE8 158 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 TXNDC9O14530 226 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 CDIPTO14735 213 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 PRKYO43930 277 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 NUAK1O60285 661 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 SRPX2O60687 465 aaPredicted RBP4.84□□□□□ -1.63
SF1-217ENST00000486960 ALX3O95076 343 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 ESR1P03372 595 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 FAM228BP0C875 321 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 ZNF35P13682 527 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 GLB1P16278 677 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 PGCP20142 388 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 OGNP20774 298 aaKnown RBP4.84□□□□□ -1.63
SF1-217ENST00000486960 LHCGRP22888 699 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 IGFBP6P24592 240 aaPredicted RBP4.84□□□□□ -1.63
SF1-217ENST00000486960 RCVRNP35243 200 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 OR3A3P47888 321 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 HCAR3P49019 387 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 CRYBA4P53673 196 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 UBE2MP61081 183 aaKnown RBP4.84□□□□□ -1.63
SF1-217ENST00000486960 SNRPFP62306 86 aaKnown RBP4.84□□□□□ -1.63
SF1-217ENST00000486960 IRF4Q15306 451 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 SNRNP35Q16560 246 aaKnown RBP4.84□□□□□ -1.63
SF1-217ENST00000486960 UPP1Q16831 310 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 NKPD1Q17RQ9 610 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 MS4A18Q3C1V0 323 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 RFTN2Q52LD8 501 aaPredicted RBP4.84□□□□□ -1.63
SF1-217ENST00000486960 CYB5R2Q6BCY4 276 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 DMKNQ6E0U4 476 aaPredicted RBP4.84□□□□□ -1.63
SF1-217ENST00000486960 CD200R1LQ6Q8B3 271 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 CREB3L2Q70SY1 520 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 ZNF367Q7RTV3 350 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 ZBTB8OSQ8IWT0 167 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 FAM109AQ8N4B1 249 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 DNAJC22Q8N4W6 341 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 NPEPL1Q8NDH3 523 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 DMBX1Q8NFW5 382 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 OR2AK2Q8NG84 335 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 OR4K1Q8NGD4 311 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 OR10X1Q8NGY0 326 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 LMO3Q8TAP4 145 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 STOML3Q8TAV4 291 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 MARC2Q969Z3 335 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 UHRF2Q96PU4 802 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 OR14A2Q96R54 314 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 CNN2Q99439 309 aaKnown RBP4.84□□□□□ -1.63
SF1-217ENST00000486960 ATP5SQ99766 215 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 SLC6A7Q99884 636 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 AGPAT1Q99943 283 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 BTBD10Q9BSF8 475 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 ALG8Q9BVK2 526 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 NXF5Q9H1B4 397 aaKnown RBP4.84□□□□□ -1.63
SF1-217ENST00000486960 OR51M1Q9H341 326 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 Q9H8V8 135 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 UGT1A8Q9HAW9 530 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 SIX2Q9NPC8 291 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 IMPAD1Q9NX62 359 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 IL36GQ9NZH8 169 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 GSKIPQ9P0R6 139 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 ST6GALNAC2Q9UJ37 374 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 FZR1Q9UM11 496 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms