RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 OC90Q02509 493 aaPredicted RBP18.03■□□□□ 0.48
HPS3-206ENST00000486530 KCNJ8Q15842 424 aa18.03■□□□□ 0.48
HPS3-206ENST00000486530 ANKRD16Q6P6B7 361 aa18.03■□□□□ 0.48
HPS3-206ENST00000486530 YRDCQ86U90 279 aaKnown RBP18.03■□□□□ 0.48
HPS3-206ENST00000486530 NKAIN3Q8N8D7 197 aa18.03■□□□□ 0.48
HPS3-206ENST00000486530 SF3B5Q9BWJ5 86 aaKnown RBP18.03■□□□□ 0.48
HPS3-206ENST00000486530 NEK6Q9HC98 313 aa18.03■□□□□ 0.48
HPS3-206ENST00000486530 PAIP2BQ9ULR5 123 aaKnown RBP18.03■□□□□ 0.48
HPS3-206ENST00000486530 LOC101059948A0A1B0GTJ6 334 aa18.03■□□□□ 0.48
HPS3-206ENST00000486530 DOK2O60496 412 aa18.03■□□□□ 0.48
HPS3-206ENST00000486530 GLSO94925 669 aaPredicted RBP18.03■□□□□ 0.48
HPS3-206ENST00000486530 GUCA1AP43080 201 aaPredicted RBP18.03■□□□□ 0.48
HPS3-206ENST00000486530 LSM6P62312 80 aaKnown RBP18.03■□□□□ 0.48
HPS3-206ENST00000486530 SNTB2Q13425 540 aaKnown RBP18.03■□□□□ 0.48
HPS3-206ENST00000486530 TAF13Q15543 124 aa18.03■□□□□ 0.48
HPS3-206ENST00000486530 MTFR2Q6P444 385 aa18.03■□□□□ 0.48
HPS3-206ENST00000486530 TMEM123Q8N131 208 aa18.03■□□□□ 0.48
HPS3-206ENST00000486530 ZNF385AQ96PM9 386 aaKnown RBP18.03■□□□□ 0.48
HPS3-206ENST00000486530 SRXN1Q9BYN0 137 aa18.03■□□□□ 0.48
HPS3-206ENST00000486530 STMN3Q9NZ72 180 aa18.03■□□□□ 0.48
HPS3-206ENST00000486530 DHFRP00374 187 aa18.02■□□□□ 0.48
HPS3-206ENST00000486530 TCRBP04435 133 aa18.02■□□□□ 0.48
HPS3-206ENST00000486530 CNR1P21554 472 aa18.02■□□□□ 0.48
HPS3-206ENST00000486530 C2orf76Q3KRA6 126 aa18.02■□□□□ 0.48
HPS3-206ENST00000486530 ZFP69Q49AA0 526 aa18.02■□□□□ 0.48
HPS3-206ENST00000486530 FOXL2NBQ6ZUU3 175 aa18.02■□□□□ 0.48
HPS3-206ENST00000486530 OR6M1Q8NGM8 313 aa18.02■□□□□ 0.48
HPS3-206ENST00000486530 GCDHQ92947 438 aaPredicted RBP18.02■□□□□ 0.48
HPS3-206ENST00000486530 INTS12Q96CB8 462 aaKnown RBP18.02■□□□□ 0.48
HPS3-206ENST00000486530 CACNG6Q9BXT2 260 aa18.02■□□□□ 0.48
HPS3-206ENST00000486530 OR2B2Q9GZK3 357 aa18.02■□□□□ 0.48
HPS3-206ENST00000486530 PNRC2Q9NPJ4 139 aaKnown RBP18.02■□□□□ 0.48
HPS3-206ENST00000486530 ZNF275Q9NSD4 429 aaPredicted RBP18.02■□□□□ 0.48
HPS3-206ENST00000486530 DEPPQ9NTK1 212 aa18.02■□□□□ 0.48
HPS3-206ENST00000486530 DDX28Q9NUL7 540 aaKnown RBP18.02■□□□□ 0.48
HPS3-206ENST00000486530 NUDT15Q9NV35 164 aa18.02■□□□□ 0.48
HPS3-206ENST00000486530 KNTC1P50748 2209 aa18.02■□□□□ 0.47
HPS3-206ENST00000486530 NAP1L6A6NFF2 107 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 A8MV72 311 aaPredicted RBP18.01■□□□□ 0.47
HPS3-206ENST00000486530 SMAD9O15198 467 aaKnown RBP18.01■□□□□ 0.47
HPS3-206ENST00000486530 SYT7O43581 403 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 CTAG2O75638 210 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 GSTT2BP0CG30 244 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 TMIGD3P0DMS9 266 aaPredicted RBP18.01■□□□□ 0.47
HPS3-206ENST00000486530 MSR1P21757 451 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 GIFP27352 417 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 HTR2CP28335 458 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 CASRP41180 1078 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 SUCLG1P53597 346 aaKnown RBP18.01■□□□□ 0.47
HPS3-206ENST00000486530 PLA2G7Q13093 441 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 LUZP2Q86TE4 346 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 GGNQ86UU5 652 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 SLC25A28Q96A46 364 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 SFXN2Q96NB2 322 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 NELFAQ9H3P2 528 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 ZFP64Q9NPA5 681 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 DIABLOQ9NR28 239 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 LRFN1Q9P244 771 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 POU2F3Q9UKI9 436 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 BOKQ9UMX3 212 aaPredicted RBP18.01■□□□□ 0.47
HPS3-206ENST00000486530 WDPCPO95876 746 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 MT-ND4P03905 459 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 RFPL3SP0C7P2 107 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 ENPP1P22413 925 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 NKX2-5P52952 324 aaPredicted RBP18.01■□□□□ 0.47
HPS3-206ENST00000486530 GRB2P62993 217 aaKnown RBP18.01■□□□□ 0.47
HPS3-206ENST00000486530 DNM1P46Q6ZS02 220 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 OR51A2Q8NGJ7 313 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 ADAMTS17Q8TE56 1095 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 FOXRED1Q96CU9 486 aaPredicted RBP18.01■□□□□ 0.47
HPS3-206ENST00000486530 B3GNT4Q9C0J1 378 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 ABI3Q9P2A4 366 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 RCE1Q9Y256 329 aa18.01■□□□□ 0.47
HPS3-206ENST00000486530 MRPS18BQ9Y676 258 aaKnown RBP18.01■□□□□ 0.47
HPS3-206ENST00000486530 TMEM272A0A1B0GTI8 110 aa18■□□□□ 0.47
HPS3-206ENST00000486530 A0A1B0GVI7 797 aa18■□□□□ 0.47
HPS3-206ENST00000486530 SPAARA0A1B0GVQ0 90 aa18■□□□□ 0.47
HPS3-206ENST00000486530 LOC390937A0A1W2PQ73 354 aa18■□□□□ 0.47
HPS3-206ENST00000486530 GGT3PA6NGU5 568 aa18■□□□□ 0.47
HPS3-206ENST00000486530 RER1O15258 196 aa18■□□□□ 0.47
HPS3-206ENST00000486530 FTH1P19P0C7X4 201 aa18■□□□□ 0.47
HPS3-206ENST00000486530 EFNB2P52799 333 aa18■□□□□ 0.47
HPS3-206ENST00000486530 RAB25P57735 213 aa18■□□□□ 0.47
HPS3-206ENST00000486530 RRAS2P62070 204 aaPredicted RBP18■□□□□ 0.47
HPS3-206ENST00000486530 PHYHD1Q5SRE7 291 aa18■□□□□ 0.47
HPS3-206ENST00000486530 GLYATL3Q5SZD4 288 aa18■□□□□ 0.47
HPS3-206ENST00000486530 ABHD17BQ5VST6 288 aa18■□□□□ 0.47
HPS3-206ENST00000486530 ZIC4Q8N9L1 334 aa18■□□□□ 0.47
HPS3-206ENST00000486530 AKAP1Q92667 903 aaKnown RBP eCLIP18■□□□□ 0.47
HPS3-206ENST00000486530 ZNF416Q9BWM5 594 aa18■□□□□ 0.47
HPS3-206ENST00000486530 RANGRFQ9HD47 186 aaPredicted RBP18■□□□□ 0.47
HPS3-206ENST00000486530 FOXD3Q9UJU5 478 aaPredicted RBP18■□□□□ 0.47
HPS3-206ENST00000486530 N6AMT1Q9Y5N5 214 aa18■□□□□ 0.47
HPS3-206ENST00000486530 STMND1H3BQB6 276 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 LMX1BO60663 402 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 GDF1P27539 372 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 CAPZA1P52907 286 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 RAG2P55895 527 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 CARD18P57730 90 aa17.99■□□□□ 0.47
HPS3-206ENST00000486530 SPOCK1Q08629 439 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms