RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 LDAHQ9H6V9 325 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 NIPAL2Q9H841 368 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 EMC7Q9NPA0 242 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 B3GAT2Q9NPZ5 323 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 CENPMQ9NSP4 180 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 GDF2Q9UK05 429 aaPredicted RBP12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 ADAM30Q9UKF2 790 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 GTF2A1LQ9UNN4 478 aa12.87□□□□□ -0.35
POLR2J3-204ENST00000486319 ZNF407Q9C0G0 2248 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 IGKV3D-15A0A087WSY6 115 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 A0A1B0GUH1 482 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 ACOD1A6NK06 481 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 NOTOA8MTQ0 251 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 ZNF878C9JN71 531 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 TMEM127O75204 238 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 SRSF10O75494 262 aaKnown RBP12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 WNT11O96014 354 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 ZNF12P17014 697 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 MMP16P51512 607 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 SRYQ05066 204 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 ZNF181Q2M3W8 571 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 C4orf17Q53FE4 359 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 IDNKQ5T6J7 187 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 NR2C2APQ86WQ0 139 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 IL17RDQ8NFM7 739 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 RBM24Q9BX46 236 aaKnown RBP12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 MIXL1Q9H2W2 232 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 ZCCHC4Q9H5U6 513 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 EXO5Q9H790 373 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 ZDHHC11Q9H8X9 412 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 COMMD3Q9UBI1 195 aa12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 NCOA6Q14686 2063 aaPredicted RBP12.86□□□□□ -0.35
POLR2J3-204ENST00000486319 LRRK2Q5S007 2527 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 TRGV5A0A0B4J1U4 118 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 TRGV8A0A0C4DH27 118 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 A0A0G2JK05 382 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 TMEM269A0A1B0GVZ9 245 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 ANKRD61A6NGH8 418 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 PIN1P1O15428 100 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 SLC19A2O60779 497 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 NPR2P20594 1047 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 CASP6P55212 293 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 MFGE8Q08431 387 aaPredicted RBP12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 SGCAQ16586 387 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 RGS21Q2M5E4 152 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 ZNF704Q6ZNC4 412 aaPredicted RBP12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 CHMP1BQ7LBR1 199 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 GPR137CQ8N3F9 429 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 DIRAS2Q96HU8 199 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 CCDC32Q9BV29 185 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 TCF7L1Q9HCS4 588 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 EMC3Q9P0I2 261 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 ASH2LQ9UBL3 628 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 OR52A1Q9UKL2 312 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 FBXL3Q9UKT7 428 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 SLC22A13Q9Y226 551 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 EMC9Q9Y3B6 208 aa12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 FLNBO75369 2602 aaKnown RBP12.85□□□□□ -0.35
POLR2J3-204ENST00000486319 TRBV5-7A0A0A0MS05 114 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 FABP12A6NFH5 140 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 UPK1BO75841 260 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 ISG15P05161 165 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 CPN1P15169 458 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 HSD11B1P28845 292 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 OR10A3P58181 314 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 MRPS34P82930 218 aaKnown RBP12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 TAF13Q15543 124 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 RIPPLY2Q5TAB7 128 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 METAP1DQ6UB28 335 aaPredicted RBP12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 CFAP77Q6ZQR2 320 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 FJX1Q86VR8 437 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 GJC3Q8NFK1 279 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 OR10S1Q8NGN2 331 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 ABHD3Q8WU67 409 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 TSEN15Q8WW01 171 aaKnown RBP12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 ZNF775Q96BV0 537 aaPredicted RBP12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 ZNF416Q9BWM5 594 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 PRRG4Q9BZD6 226 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 DEFB127Q9H1M4 99 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 MOB1AQ9H8S9 216 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 RNF122Q9H9V4 155 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 PARPBPQ9NWS1 579 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 ABRACLQ9P1F3 81 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 DAPK2Q9UIK4 370 aa12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 USP9XQ93008 2570 aaPredicted RBP12.84□□□□□ -0.35
POLR2J3-204ENST00000486319 ISPDA4D126 451 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 WIPF3A6NGB9 483 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 UBCP0CG48 685 aaKnown RBP12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 EPXP11678 715 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 ABOP16442 354 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 ACHEP22303 614 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 APEX1P27695 318 aaKnown RBP12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 THBS2P35442 1172 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 SOX2P48431 317 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 PER3P56645 1201 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 GRB2P62993 217 aaKnown RBP12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 RNPS1Q15287 305 aaKnown RBP12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 ODF4Q2M2E3 257 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 CEP78Q5JTW2 689 aa12.83□□□□□ -0.35
POLR2J3-204ENST00000486319 BCL2L15Q5TBC7 163 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms